Job Description P33916 Confidence 100.00% Date Thu Jan 5 11:52:44 GMT 2012 Rank 28 Aligned Residues 286 % Identity 26% Template c3d31B_ PDB info PDB header:transport protein Chain: B: PDB Molecule:sulfate/molybdate abc transporter, atp-binding PDBTitle: modbc from methanosarcina acetivorans Resolution 3.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	I	E	N	L	S	V	G	F	R	H	Q	Q	T	V	R	T	V	V	N	D	V	S	L	Q	I	E	A	G	E	T	L	A	L	V	G	E	S	G	S	G	K	S	V	T	A	L	S	I	L	R	L	L	P	S	P	P	V	E	Y	L	S	G	D	I	R	F	H	G	E	S	L	L	H	A	S	D	Q
Query Conservation
Alig confidence															.	.	.	.	.																																						.	.	.	.	.
Template Conservation															.	.	.	.	.																																						.	.	.	.	.
Template Sequence		M	I	E	I	E	S	L	S	R	K	W	K	N	.	.	.	.	.	F	S	L	D	N	L	S	L	K	V	E	S	G	E	Y	F	V	I	L	G	P	T	G	A	G	K	T	L	F	L	E	L	I	A	G	F	H	.	.	.	.	.	V	P	D	S	G	R	I	L	L	D	G	K	D	V	T	D	L	S	P	E
Template Known Secondary structure													S	S	.	.	.	.	.												T	T										T												T	S	S	.	.	.	.	.			S							T	T				T	T	S
Template Predicted Secondary structure															.	.	.	.	.																																						.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.						.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	R	G	V	R	G	N	K	I	A	M	I	F	Q	E	P	M	V	S	L	N	P	L	H	T	L	E	K	Q	L	Y	E	V	L	S	L	H	R	G	M	R	R	E	A	A	R	G	E	I	L	N	C	L	D	R	V	G	I	R	Q	A	A	K	R	L	T	D	Y	P	H	Q	L	S	G	G	E	R	Q	R
Query Conservation
Alig confidence					.	.	.	.	.	.										.	.																										.	.	.	.														.	.	.
Template Conservation					.	.	.	.	.	.										.	.																										.	.	.	.														.	.	.
Template Sequence		K	H	D	.	.	.	.	.	.	I	A	F	V	Y	Q	N	Y	S	.	.	L	F	P	H	M	N	V	K	K	N	L	E	F	G	M	R	M	K	K	I	K	D	P	K	R	.	.	.	.	V	L	D	T	A	R	D	L	K	I	E	H	L	.	.	.	L	D	R	N	P	L	T	L	S	G	G	E	Q	Q	R
Template Known Secondary structure				T	.	.	.	.	.	.						T	T			.	.			T	T	S																					.	.	.	.								T	T		T	T	T	.	.	.	T	T	S		G	G	G	S
Template Predicted Secondary structure					.	.	.	.	.	.										.	.																										.	.	.	.														.	.	.
Template SS confidence
		71	.	.							.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	I	A	M	A	L	L	T	R	P	E	L	L	I	A	D	E	P	T	T	A	L	D	V	S	V	Q	A	Q	I	L	Q	L	L	R	E	L	Q	G	E	L	N	M	G	M	L	F	I	T	H	N	L	S	I	V	R	K	L	A	H	R	V	A	V	M	Q	N	G	R	C	V	E	Q	N	Y	A	A	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	L	A	R	A	L	V	T	N	P	K	I	L	L	L	D	E	P	L	S	A	L	D	P	R	T	Q	E	N	A	R	E	M	L	S	V	L	H	K	K	N	K	L	T	V	L	H	I	T	H	D	Q	T	E	A	R	I	M	A	D	R	I	A	V	V	M	D	G	K	L	I	Q	V	G	K	P	E	E	I
Template Known Secondary structure								T	T	S			S						S	S	S	T	T	S																			T	T								S										S						S	S	S
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	S	P	T	H	P	Y	T	Q	K	L	L	N	S	E	P	S	G	D	P	V	P	L	P	E	P	A	S	T	L	L	D	V	E	Q	L	Q	V	A	F	P	I	R	K	G	I	L	K	R	I	V	D	H	N	V	V	V	K	N	I	S	F	T	L	R	A	G	E	T	L	G	L	V	G	E	S	G	S	G
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.
Template Sequence		F	E	K	P	V	E	G	R	V	A	S	F	V	G	F	E	N	V	L	K	G	R	V	I	S	A	E	Q	G	L	L	R	I	R	V	G	.	.	.	.	.	.	.	.	.	E	V	V	I	D	A	A	G	D	M	E	V	G	D	Q	V	Y	A	F	L	R	P	E	N	I	A	L	S	K	S	S	T	Q	S	S
Template Known Secondary structure			S	S			T	T								S													T	T							T	.	.	.	.	.	.	.	.	.	T							S	S			T	T									G	G	G					S	S					S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.										.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions