Job Description P33916 Confidence 97.12% Date Thu Jan 5 11:52:44 GMT 2012 Rank 148 Aligned Residues 122 % Identity 10% Template c3bgwD_ PDB info PDB header:replication Chain: D: PDB Molecule:dnab-like replicative helicase; PDBTitle: the structure of a dnab-like replicative helicase and its interactions2 with primase Resolution 3.91 Å

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		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	A	G	E	T	L	G	L	V	G	E	S	G	S	G	K	S	T	T	G	L	A	L	L	R	L	I	N	S	Q	G	S	I	I	F	D	G	Q	P	L	Q	N	L	N	R	R	Q	L	L	P	I	R	H	R	I	Q	V	V	F	Q	D	P	N	S	S	L	N	P	R	L	N	V	L	Q	I	I	E	E	G
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	K	R	R	N	F	V	L	I	A	A	R	P	S	M	G	K	T	A	F	A	L	K	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	M	S	D	N	D	D	V	V	N	L	H	S	L	E	M	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		B		S	S									S	S	S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T								S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.																						.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.		.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		L	R	V	H	Q	P	T	L	S	A	A	Q	R	E	Q	Q	V	I	A	V	M	H	E	.	V	G	L	D	P	E	T	R	H	R	Y	P	A	E	F	S	G	G	Q	R	Q	R	I	A	I	A	R	A	L	I	L	K	P	S	L	I	I	L	D	E	P	T	S	S	L	D	K	T	V	Q	A	Q	I	L	T	L
Query Conservation																									.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.											.																																															.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	N	I	K	R	L	I	V	T	A	G	S	I	N	A	Q	K	I	K	A	A	R	R	D	F	A	S	E	D	W	G	K	L	S	M	A	I	G	E	I	S	N	S	N	I	N	I	F	D	K	A	G	Q	S	V	N	.	.	.	.	.	Y	I	W	S	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.												S									T	T	G	G	G	T			S														T	S								S	S		B			.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.	.
Template SS confidence
															236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.						.	.	.	.	.
		468	.	470	.	.	.	.	.	.			.	.	.	480	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		L	K	S	L	Q	Q	K	H	Q	.	.	L	A	Y	L	F	I	S	H
Query Conservation											.	.
Alig confidence											.	.
Template Conservation
Template Sequence		T	R	Q	T	K	R	K	N	P	G	K	R	V	I	V	M	I	D	Y
Template Known Secondary structure									S		S	S
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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