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Job DescriptionP33916
Confidence97.75%DateThu Jan 5 11:52:44 GMT 2012
Rank113Aligned Residues161
% Identity20%Templatec2zjbB_
PDB info PDB header:recombinationChain: B: PDB Molecule:meiotic recombination protein dmc1/lim15 homolog; PDBTitle: crystal structure of the human dmc1-m200v polymorphic2 variant
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70.........80.........90.........100.........110.
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Query Sequence  IEAGETLALVGESGSGKSVTALSILRLLPSPPVEYLSGDIRFHGESLLHASDQTLRGVRGNKIAMIFQEPMVSLNPLHTL
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Template Sequence  IESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGK. . . . . . . . . . . . . . . . . . . . . . IIFIDTEN. . . TFRPDRL
Template Known Secondary structure  SSS

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   116...120.........130.........140.........150..... ....160... ......170
 
   112.......120.........130.........140.........150.........160.........170.........180.........190
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Query Sequence  EKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVS.
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Template Sequence  RDIADRFNVD. . . . . . . . . . . . HDAVLDNVLYA. . . . . RAYTSEHQVELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDF
Template Known Secondary structure  GGGGT

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   171........180 .........190. ........200.........210.........220.........230...
 
   191........200.........210.........220.........230....
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Query Sequence  . . . . . . . . . . . VQAQILQLLRELQGELNMGMLFITHNLSIVRKLAHRVAVMQNGR
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Template Sequence  SGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMGHILAHASTTRISLRKGR
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   234.....240.........250.........260.........270.........280........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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