Job Description P33916 Confidence 100.00% Date Thu Jan 5 11:52:44 GMT 2012 Rank 40 Aligned Residues 218 % Identity 31% Template c2yl4A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:atp-binding cassette sub-family b member 10, PDBTitle: structure of the human mitochondrial abc transporter, abcb10 Resolution 2.85 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	I	E	N	L	S	V	G	F	R	H	Q	Q	T	V	R	T	V	V	N	D	V	S	L	Q	I	E	A	G	E	T	L	A	L	V	G	E	S	G	S	G	K	S	V	T	A	L	S	I	L	R	L	L	P	S	P	P	V	E	Y	L	S	G	D	I	R	F	H	G	E	S	L	L	H	A	S	D	Q	T
Query Conservation
Alig confidence																	.																																							.	.	.	.	.
Template Conservation																	.																																							.	.	.	.	.
Template Sequence		L	E	F	K	N	V	H	F	A	Y	P	A	R	P	E	.	V	P	I	F	Q	D	F	S	L	S	I	P	S	G	S	V	T	A	L	V	G	P	S	G	S	G	K	S	T	V	L	S	L	L	L	R	L	Y	.	.	.	.	.	D	P	A	S	G	T	I	S	L	D	G	H	D	I	R	Q	L	N	P	V	W
Template Known Secondary structure												S	S		T	T	.	S												T	T									T	T	S	S	S	T							T	T	S	S	.	.	.	.	.			S							T	T			T	T	T	B
Template Predicted Secondary structure																	.																																							.	.	.	.	.
Template SS confidence
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.		.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.						.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150									.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.
Query Sequence		L	R	G	V	R	G	N	K	I	A	M	I	F	Q	E	P	M	V	S	L	N	P	L	H	T	L	E	K	Q	L	Y	E	V	L	S	L	H	R	G	M	R	R	E	A	A	R	G	E	I	L	N	C	L	D	R	V	G	I	R	Q	A	A	K	R	L	.	.	.	.	.	.	.	.	T	D	Y	P	H	Q	L
Query Conservation																																																																			.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.											.	.	.																										.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.											.	.	.																										.	.	.	.
Template Sequence		L	R	.	.	.	.	S	K	I	G	T	V	S	Q	E	P	.	.	.	I	L	F	S	C	S	I	A	E	N	I	A	Y	G	A	D	D	P	S	S	V	T	A	E	E	.	.	.	.	I	Q	R	V	A	E	V	A	N	A	V	A	F	I	R	N	F	P	Q	G	F	N	T	V	V	G	E	K	G	V	L	L
Template Known Secondary structure				.	.	.	.		S						S	S		.	.	.				S	S	B							T	T	S	S	S	T	T	T	S					.	.	.	.								T	T							T	S	S	S	G	G	G		B		S	S	S	S
Template Predicted Secondary structure				.	.	.	.											.	.	.																										.	.	.	.
Template SS confidence
		566	.					.	.	570	.	.	.	.	.	.	.				.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.					.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	G	E	R	Q	R	V	M	I	A	M	A	L	L	T	R	P	E	L	L	I	A	D	E	P	T	T	A	L	D	V	S	V	Q	A	Q	I	L	Q	L	L	R	E	L	Q	G	E	L	N	M	G	M	L	F	I	T	H	N	L	S	I	V	R	K	L	A	H	R	V	A	V	M	Q	N	G	R	C	V	E
Query Conservation
Alig confidence																																																	.	.																	.
Template Conservation																																																	.	.																	.
Template Sequence		S	G	G	Q	K	Q	R	I	A	I	A	R	A	L	L	K	N	P	K	I	L	L	L	D	E	A	T	S	A	L	D	A	E	N	E	Y	L	V	Q	E	A	L	D	R	L	M	D	.	.	G	R	T	V	L	V	I	A	H	R	L	S	T	I	K	N	.	A	N	M	V	A	V	L	D	Q	G	K	I	T	E
Template Known Secondary structure																				S									S	S																		T	.	.	T	S															.	S	S							T	T
Template Predicted Secondary structure																																																	.	.																	.
Template SS confidence
		635	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.			.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.		.	.	700	.	.	.	.	.	.	.	.	.	710	.
		238	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	Y	A	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	G	K	H	E	E
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		712	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions