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Job DescriptionP33916
Confidence97.63%DateThu Jan 5 11:52:44 GMT 2012
Rank117Aligned Residues146
% Identity14%Templatec2q6tB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:dnab replication fork helicase; PDBTitle: crystal structure of the thermus aquaticus dnab monomer
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   309310.........320.........330.........340.........350.........360.........370.........380........
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Query Sequence  LRAGETLGLVGESGSGKSTTGLALLRLINSQGSIIFDGQPLQNLNRRQLLPIRHRIQVVFQDPNSSLNPRLNVLQIIEEG
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Template Sequence  LGPGSLNIIAARPAMGKTAFALTIAQ. . . . . . . . . . . . . . . . . . . . NAALKEGVGVGIYSLEMPA. . . . . . . . . AQLTLR
Template Known Secondary structure 

TT

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   197..200.........210.........220.. .......230.........240. ......
 
   389390........ .400.........410.........420.........430.........440.........450.........460..
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Query Sequence  LRVHQPTLSA. . . . . . AQREQQVIAVMHEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQA
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Template Sequence  MMCSEARIDMNRVRLTDRDFSRLVDVASRLSEA. PIYIDDTPDLTLMEVRARARRLVSQNQVGLIIIDYLQLMSGPNRQQ
Template Known Secondary structure  TT

GGGT


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TT
B

GGG
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   248.250.........260.........270.........280 .........290.........300.........310.........320......
 
   463.... ..470.........480....
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Query Sequence  QILTL. . . LKSLQQKHQLAYLFISH
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Template Sequence  EIAAISRGLKALARELGIPIIALSQ
Template Known Secondary structure  TS
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   337..340.........350.........360.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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