Return to main results Retrieve Phyre Job Id

Job DescriptionP33916
Confidence100.00%DateThu Jan 5 11:52:44 GMT 2012
Rank15Aligned Residues240
% Identity31%Templatec2olkD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:amino acid abc transporter; PDBTitle: abc protein artp in complex with adp-beta-s
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  MTQTLLAIENLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVEYLSGDIRFHGESLLH
Query Conservation 
    
   


  
         
  

  
  

   


 








  
 
 
        

 
   
     
Alig confidence 

..










....







































.....















Template Conservation 
 .. 
 
 


  
....     
  

  
  


  
 
 









 
 
  .....    
 
 
 
     
Template Sequence  LQ. . MIDVHQLKKSF. . . . GSLEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLE. . . . . DFDEGEIIIDGINLKA
Template Known Secondary structure 

..SS....SS

TT

STTSSTTSS.....

STTTTS
Template Predicted Secondary structure 

......
















.....









Template SS confidence 















































































  
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions