Job Description P33916 Confidence 96.99% Date Thu Jan 5 11:52:44 GMT 2012 Rank 164 Aligned Residues 132 % Identity 16% Template c2og2A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:putative signal recognition particle receptor; PDBTitle: crystal structure of chloroplast ftsy from arabidopsis2 thaliana Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	S	F	T	L	R	A	G	E	T	L	G	L	V	G	E	S	G	S	G	K	S	T	T	G	L	A	L	L	R	L	I	N	S	Q	G	S	I	I	F	D	G	Q	P	L	Q	N	L	N	R	R	Q	L	L	P	I	R	H	R	I	Q	V	V	F	Q	D	P	N	S	S	L	N	P	R	L	N	V	L	Q
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Sequence		E	L	Q	L	G	F	R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R	L	K	N	E	G	T	K	V	L	M	A	A	G	D	T	F	R	A	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S					S	S	S	S									T	T	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T											S			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.																						.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.		.	.	.	.	.	.	460	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		I	I	E	E	G	L	R	V	H	Q	P	T	L	S	A	A	Q	R	E	Q	Q	V	I	A	V	M	H	E	V	G	L	D	P	E	T	R	H	R	Y	P	A	E	F	S	G	G	Q	R	Q	R	I	A	I	A	R	A	L	I	L	K	P	S	L	I	I	L	D	E	P	T	.	S	S	L	D	K	T	V	Q	A
Query Conservation																																																																								.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.																												.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	S	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	V	V	A	E	G	D	K	A	.	.	K	A	A	T	V	L	S	K	A	V	K	R	G	K	E	E	G	Y	D	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T							S	S	S	S		.	.																T	T		S										S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template SS confidence
																		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.					.	480	.	.	.
Predicted Secondary structure																		.	.	.	.
Query SS confidence																		.	.	.	.
Query Sequence		Q	I	L	T	L	L	K	S	L	Q	Q	K	H	Q	L	A	.	.	.	.	Y	L	F	I	S
Query Conservation																		.	.	.	.
Alig confidence																		.	.	.	.
Template Conservation
Template Sequence		E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D
Template Known Secondary structure														S	T	T			S
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions