Job Description P33916 Confidence 100.00% Date Thu Jan 5 11:52:44 GMT 2012 Rank 38 Aligned Residues 222 % Identity 30% Template c2hydB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:abc transporter homolog; PDBTitle: multidrug abc transporter sav1866 Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	T	L	L	A	I	E	N	L	S	V	G	F	R	H	Q	Q	T	V	R	T	V	V	N	D	V	S	L	Q	I	E	A	G	E	T	L	A	L	V	G	E	S	G	S	G	K	S	V	T	A	L	S	I	L	R	L	L	P	S	P	P	V	E	Y	L	S	G	D	I	R	F	H	G	E	S	L	L	H	A
Query Conservation
Alig confidence																		.	.																																									.	.	.	.	.
Template Conservation																		.	.																																									.	.	.	.	.
Template Sequence		K	Q	G	R	I	D	I	D	H	V	S	F	Q	Y	N	D	.	.	N	E	A	P	I	L	K	D	I	N	L	S	I	E	K	G	E	T	V	A	F	V	G	M	S	G	G	G	K	S	T	L	I	N	L	I	P	R	F	Y	.	.	.	.	.	D	V	T	S	G	Q	I	L	I	D	G	H	N	I	K	D	F
Template Known Secondary structure			S												S		S	.	.	S	S			S										T	T								S	T	T	S	S						T	T	T	T	T	S	S	.	.	.	.	.			S							T	T			G	G	G	S
Template Predicted Secondary structure																		.	.																																									.	.	.	.	.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.			.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.						.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.									150	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.
Query Sequence		S	D	Q	T	L	R	G	V	R	G	N	K	I	A	M	I	F	Q	E	P	M	V	S	L	N	P	L	H	T	L	E	K	Q	L	Y	E	V	L	S	L	H	R	G	M	R	R	E	A	A	R	G	E	I	L	N	C	L	D	R	V	G	I	R	Q	A	A	K	R	.	.	.	.	.	.	.	.	L	T	D	Y
Query Conservation																																																																						.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.												.	.																				.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.												.	.																				.	.	.	.	.	.	.	.
Template Sequence		L	T	G	S	L	R	.	.	.	.	N	Q	I	G	L	V	Q	Q	D	N	I	.	.	L	F	S	D	T	V	K	E	N	I	L	L	G	R	P	T	A	T	D	.	.	.	.	.	.	.	.	E	E	V	V	E	A	A	K	M	A	N	A	H	D	F	I	M	N	L	P	Q	G	Y	D	T	E	V	G	E	R
Template Known Secondary structure								.	.	.	.		T						S	S			.	.			S	S	B						G	G	G		S	S				.	.	.	.	.	.	.	.										T	T							T	S	T	T	G	G	G		B			G	G
Template Predicted Secondary structure								.	.	.	.												.	.																				.	.	.	.	.	.	.	.
Template SS confidence
		409	410	.	.	.	.					.	.	.	.	.	420	.	.	.	.	.			.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.									.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	Q	L	S	G	G	E	R	Q	R	V	M	I	A	M	A	L	L	T	R	P	E	L	L	I	A	D	E	P	T	T	A	L	D	V	S	V	Q	A	Q	I	L	Q	L	L	R	E	L	Q	G	E	L	N	M	G	M	L	F	I	T	H	N	L	S	I	V	R	K	L	A	H	R	V	A	V	M	Q	N	G
Query Conservation
Alig confidence																																																					.	.																.
Template Conservation																																																					.	.																.
Template Sequence		G	V	K	L	S	G	G	Q	K	Q	R	L	S	I	A	R	I	F	L	N	N	P	P	I	L	I	L	D	E	A	T	S	A	L	D	L	E	S	E	S	I	I	Q	E	A	L	D	V	L	S	K	.	.	D	R	T	T	L	I	V	A	H	R	L	S	T	I	T	.	H	A	D	K	I	V	V	I	E	N	G
Template Known Secondary structure		G	T	T	S																			S						S	T	T	T	T																	T	T	.	.	T	S							S	S	G	G	G	T	T	.	T		S							T	T
Template Predicted Secondary structure																																																					.	.																.
Template SS confidence
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.			.	.	.	.	530	.	.	.	.	.	.	.	.	.	540		.	.	.	.	.	.	.	.	.	550	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	C	V	E	Q	N	Y	A	A	T	L	F	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	I	V	E	T	G	T	H	R	E	L	I	A	K
Template Known Secondary structure															T
Template Predicted Secondary structure
Template SS confidence
		552	.	.	.	.	.	.	.	560	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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