Job Description P33916 Confidence 100.00% Date Thu Jan 5 11:52:44 GMT 2012 Rank 56 Aligned Residues 209 % Identity 27% Template c2ghiD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:transport protein; PDBTitle: crystal structure of plasmodium yoelii multidrug resistance2 protein 2 Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	Q	T	L	L	A	I	E	N	L	S	V	G	F	R	H	Q	Q	T	V	R	T	V	V	N	D	V	S	L	Q	I	E	A	G	E	T	L	A	L	V	G	E	S	G	S	G	K	S	V	T	A	L	S	I	L	R	L	L	P	S	P	P	V	E	Y	L	S	G	D	I	R	F	H	G	E	S	L	L	H
Query Conservation
Alig confidence				.													.	.	.	.	.	.																																									.	.	.	.	.	.
Template Conservation				.													.	.	.	.	.	.																																									.	.	.	.	.	.
Template Sequence		F	G	.	V	N	I	E	F	S	D	V	N	F	S	Y	.	.	.	.	.	.	H	R	T	L	K	S	I	N	F	F	I	P	S	G	T	T	C	A	L	V	G	H	T	G	S	G	K	S	T	I	A	K	L	L	Y	R	F	Y	D	A	.	.	.	.	.	.	E	G	D	I	K	I	G	G	K	N	V	N	K
Template Known Secondary structure		T		.													.	.	.	.	.	.			S										T	T								S	T	T	S	S									T	T	S	S			.	.	.	.	.	.							T	T			G	G	G
Template Predicted Secondary structure				.													.	.	.	.	.	.																																									.	.	.	.	.	.
Template SS confidence
		14	.		.	.	.	.	20	.	.	.	.	.	.	.							.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.							.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.
Predicted Secondary structure																																																																														.	.
Query SS confidence																																																																														.	.
Query Sequence		A	S	D	Q	T	L	R	G	V	R	G	N	K	I	A	M	I	F	Q	E	P	M	V	S	L	N	P	L	H	T	L	E	K	Q	L	Y	E	V	L	S	L	H	R	G	M	R	R	E	A	A	R	G	E	I	L	N	C	L	D	R	V	G	I	R	Q	A	A	K	R	L	T	D	Y	P	H	Q	.	.	L	S
Query Conservation																																																																														.	.
Alig confidence									.	.	.	.												.	.																				.	.	.	.	.	.	.	.																										.	.
Template Conservation									.	.	.	.												.	.																				.	.	.	.	.	.	.	.
Template Sequence		Y	N	R	N	S	I	R	.	.	.	.	S	I	I	G	I	V	P	Q	D	T	I	.	.	L	F	N	E	T	I	K	Y	N	I	L	Y	G	K	L	D	A	T	D	.	.	.	.	.	.	.	.	E	E	V	I	K	A	T	K	S	A	Q	L	Y	D	F	I	E	A	L	P	K	K	W	D	T	I	V	L	S
Template Known Secondary structure		S							.	.	.	.	T	T						S	S			.	.			S	S	B							T	T	S	T	T				.	.	.	.	.	.	.	.										T	T								S	T	T	G	G	G		B
Template Predicted Secondary structure									.	.	.	.												.	.																				.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.									.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	E	R	Q	R	V	M	I	A	M	A	L	L	T	R	P	E	L	L	I	A	D	E	P	T	T	A	L	D	V	S	V	Q	A	Q	I	L	Q	L	L	R	E	L	Q	G	E	L	N	M	G	M	L	F	I	T	H	N	L	S	I	V	R	K	L	A	H	R	V	A	V	M	Q	N	G	R	C	V	E	Q
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.								.															.
Template Conservation																																.	.	.	.	.	.	.	.	.	.								.															.
Template Sequence		G	G	E	R	Q	R	I	A	I	A	R	C	L	L	K	D	P	K	I	V	I	F	D	D	S	K	T	E	Y	L	.	.	.	.	.	.	.	.	.	.	F	Q	K	A	V	E	D	.	N	R	T	L	I	I	I	A	H	R	L	S	T	I	.	S	S	A	E	S	I	I	L	L	N	K	G	K	I	V	E	K
Template Known Secondary structure																T			S													.	.	.	.	.	.	.	.	.	.								.									S	S	G	G	G	S	.	T	T		S							T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.								.															.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.											.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	A	A	T	L	F	A	S	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	T	H	K	D	L	L	K	L	N
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions