Job Description P33916 Confidence 100.00% Date Thu Jan 5 11:52:44 GMT 2012 Rank 42 Aligned Residues 234 % Identity 25% Template c2d3wB_ PDB info PDB header:biosynthetic protein Chain: B: PDB Molecule:probable atp-dependent transporter sufc; PDBTitle: crystal structure of escherichia coli sufc, an atpase2 compenent of the suf iron-sulfur cluster assembly machinery Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	I	E	N	L	S	V	G	F	R	H	Q	Q	T	V	R	T	V	V	N	D	V	S	L	Q	I	E	A	G	E	T	L	A	L	V	G	E	S	G	S	G	K	S	V	T	A	L	S	I	L	R	L	L	P	S	P	P	V	E	Y	L	S	G	D	I	R	F	H	G	E	S	L	L	H	A	S	D	Q
Query Conservation
Alig confidence													.	.	.	.																																										.	.	.
Template Conservation													.	.	.	.																																										.	.	.
Template Sequence		M	L	S	I	K	D	L	H	V	S	V	.	.	.	.	E	D	K	A	I	L	R	G	L	S	L	D	V	H	P	G	E	V	H	A	I	M	G	P	N	G	S	G	K	S	T	L	S	A	T	L	A	G	R	E	D	.	.	.	Y	E	V	T	G	G	T	V	E	F	K	G	K	D	L	L	A	L	S	P	E
Template Known Secondary structure												S	.	.	.	.	S	S													T	T									T	T	S											T		T	T	.	.	.											T	T			G	G	G	S
Template Predicted Secondary structure													.	.	.	.																																										.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.					.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120							.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.
Query Sequence		T	L	R	G	V	R	G	N	K	I	A	M	I	F	Q	E	P	M	V	S	L	N	P	L	H	T	L	E	K	Q	L	Y	E	V	L	S	.	.	.	.	.	.	L	H	R	G	M	R	R	E	A	A	R	G	E	I	L	N	C	L	D	R	V	G	I	R	Q	A	A	K	R	L	T	D	Y	P	H	Q	L	S
Query Conservation																																						.	.	.	.	.	.
Alig confidence						.	.	.												.	.																	.	.	.	.	.	.																													.
Template Conservation						.	.	.												.	.																																																			.
Template Sequence		D	R	A	G	.	.	.	E	G	I	F	M	A	F	Q	Y	P	V	.	.	E	I	P	G	V	S	N	Q	F	F	L	Q	T	A	L	N	A	V	R	S	Y	R	G	Q	E	T	L	D	R	F	D	F	Q	D	L	M	E	E	K	I	A	L	L	K	M	P	E	D	L	L	.	T	R	S	V	N	V	G	F	S
Template Known Secondary structure						.	.	.		T										.	.			T	T																		T	T																				T	T			T	T	T	T	.	T
Template Predicted Secondary structure						.	.	.												.	.																																																			.
Template SS confidence
		74	.	.	.				.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	E	R	Q	R	V	M	I	A	M	A	L	L	T	R	P	E	L	L	I	A	D	E	P	T	T	A	L	D	V	S	V	Q	A	Q	I	L	Q	L	L	R	E	L	Q	G	E	L	N	M	G	M	L	F	I	T	H	N	L	S	I	V	R	K	L	A	H	R	V	A	V	M	Q	N	G	R	C	V	E	Q
Query Conservation
Alig confidence																												.																			.
Template Conservation																												.																			.
Template Sequence		G	G	E	K	K	R	N	D	I	L	Q	M	A	V	L	E	P	E	L	C	I	L	D	E	S	D	.	S	L	D	I	D	A	L	K	V	V	A	D	G	V	N	S	L	R	.	D	G	K	R	S	F	I	I	V	T	H	Y	R	I	L	D	Y	I	K	P	D	Y	V	H	V	L	Y	Q	G	R	I	V	K	S
Template Known Secondary structure																			S									.																			.		S	S	S																	S							T	T
Template Predicted Secondary structure																												.																			.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	A	A	T	L	F	A	S	P	T	H	P	Y	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	D	F	T	L	V	K	Q	L	E	E	Q	G	Y	G
Template Known Secondary structure			S	T	T								T	T	G	G
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions