Return to main results Retrieve Phyre Job Id

Job DescriptionP33916
Confidence95.30%DateThu Jan 5 11:52:44 GMT 2012
Rank470Aligned Residues27
% Identity26%Templatec1xwiA_
PDB info PDB header:protein transportChain: A: PDB Molecule:skd1 protein; PDBTitle: crystal structure of vps4b
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........
Predicted Secondary structure 










Query SS confidence 


























Query Sequence  EAGETLALVGESGSGKSVTALSILRLL
Query Conservation    

   


 








  
 
 
Alig confidence 


























Template Conservation      



 







 

 


   
Template Sequence  TPWRGILLFGPPGTGKSYLAKAVATEA
Template Known Secondary structure 


SSSSSS
T
Template Predicted Secondary structure 









Template SS confidence 


























   165....170.........180.........190.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions