Job Description P33916 Confidence 97.89% Date Thu Jan 5 11:52:44 GMT 2012 Rank 108 Aligned Residues 123 % Identity 22% Template c1xp8A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:reca protein; PDBTitle: "deinococcus radiodurans reca in complex with atp-gamma-s" Resolution 2.50 Å

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		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	A	G	E	T	L	G	L	V	G	E	S	G	S	G	K	S	T	T	G	L	A	L	L	R	L	I	N	S	Q	G	S	I	I	F	D	G	Q	P	L	Q	N	L	N	R	R	Q	L	L	P	I	R	H	R	I	Q	V	V	F	Q	D	P	N	S	S	L	N	P	R	L	N	V	L	Q	I	I	E	E	G
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Sequence		I	P	R	G	R	I	T	E	I	Y	G	P	E	S	G	G	K	T	T	L	A	L	A	I	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	Q	K	A	G	G	T	C	A	F	I	D	A	E	H	A	L	D	P	V	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T	S							S	T	T	S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T								S	S							.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.																								.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450									.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.
Query Sequence		L	R	V	H	Q	P	T	L	S	A	A	Q	R	E	Q	Q	V	I	A	V	M	H	E	V	G	L	D	P	E	T	R	H	R	Y	P	A	E	F	S	G	G	Q	R	Q	R	I	A	I	A	R	A	L	I	L	K	P	S	L	I	I	L	D	.	.	.	.	.	.	.	.	E	P	T	S	S	L	D	K	T	V
Query Conservation																																																																.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																														.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	R	A	L	G	V	N	T	D	E	L	L	.	V	S	Q	P	D	N	G	E	Q	A	L	E	I	M	E	L	L	V	R	S	G	A	I	D	V	V	V	V	D	S	V	A	A	L	T	P	R	A	E	I	P	G	L	Q	A	R	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T			G	G	G			.					S	S													T	T	T			S							T	T	T				S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
																					115	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	Q	I	L	T	L	L	K	S	L	Q	Q	K	H	Q	L	A	Y	L	F	I	S	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	S	Q	A	L	R	K	L	T	A	I	L	S	K	T	G	T	A	A	I	F	I	N	Q
Template Known Secondary structure														T	T	T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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