 |
Job Description | P00370 | Confidence | 93.60% | Date | Thu Jan 5 10:56:35 GMT 2012 |
Rank | 384 | Aligned Residues | 106 |
% Identity | 23% | Template | d1obfo1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
|
Resolution | 1.7 |
|
 |
  |   |
234 | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | |
|
|
|
. | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . |
|  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | V | S | V | S | G | S | G | N | V | A | Q | Y | A | I | E | K | A | M | E | F | G | . |
. |
. |
. |
A | R | V | I | T | A | S | D | S | S | G | T | V | V | D | E | S | G | F | T | K | E | K | L | A | R | L | I | E | I | K | A | S | R | D | G | R | V | A | D | Y | A | K | E | F | G | L | V | Y | L | E | G | Q | Q |
Query Conservation |   |
  |
|
|
|
|
|   |
|
|
|
|   |   |   |
|   |   |
|   |   |   |
| . | . | . | . |
|
|
|
|
|
|
|
|   |   |
|   |
|
|
|
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|   |
Template Sequence |   |
R | V | A | I | N | G | Y | G | R | I | G | R | N | I | L | R | A | H | Y | E | G | G | K | S | H | D | I | E | I | V | A | I | N | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | G | D | P | K | T | N | A | H | L | T | R | Y | D | T | A | H | G | K | F | P | G | T | V | S | V | N | G | S | Y | M | V | V | N | G | D |
Template Known Secondary structure |   |
 |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| S | S |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | S | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | T |  |  |
| S | S |
|  |  |  |  | T | T |  |  |  |  | T | T |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | W | S | L | P | V | D | I | A | L | P | C | A | T | Q | N | E | L | D | V | D | A | A | H | Q | L | I | A | N | G | V | K | A | V | A | E | G | A | N | M | P |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |
|   |   |   |
|
|   |   |
|   |
|   |   |   |
|
|
|
|
|
|
|
|   |
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |   |
|
|   |   |
|
|
|   |   |   |
|
|
|   |
|
|
|   |
| . |
|   |
|   |
|   |   |   |
|   |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|   |   |
Template Sequence |   |
K | I | R | V | D | A | N | R | N | P | A | Q | L | P | W | G | A | L | K | V | D | V | V | L | E | C | T | . |
G | F | F | T | T | K | E | K | A | G | A | H | I | K | G | G | A | K | K | V | I | I | S | A | P | G | G |
Template Known Secondary structure |   |
 |  |  |  |  |
|
| S |
| G | G | G | S |
| T | T | T | T | T |
| S |  |  |  |  |
| S | . | S | S |
|
| S |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  | S | S |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |
|
| . |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|