 |
Job Description | P00370 | Confidence | 94.73% | Date | Thu Jan 5 10:56:35 GMT 2012 |
Rank | 293 | Aligned Residues | 118 |
% Identity | 19% | Template | d1i32a1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
|
Resolution | 2.60 |
|
 |
  |   |
231 | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . |
|  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | G | M | R | V | S | V | S | G | S | G | N | V | A | Q | Y | A | I | E | K | A | M | E | F | G | . |
. |
. |
. |
. |
A | R | V | I | T | A | S | D | S | S | G | T | V | V | D | E | S | G | F | T | K | E | K | L | A | R | L | I | E | I | K | A | S | R | D | G | R | V | A | D | Y | A | K | E | F | G | L | V | Y | L |
Query Conservation |   |
  |
|   |   |
|
|
|
|
|   |
|
|
|
|   |   |   |
|   |   |
|   |   |   |
| . | . | . | . | . |
|
|
|
|
|
|
|
|   |   |
|   |
|
|
|
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   | . | . | . | . | . | . | . | . |   |   |   |
|   |   |
|
|
|
|   | . | . | . | . | . | . | . |
|
|
|   |
|
|   |
|   |   |   |
|   |   |
Template Sequence |   |
A | P | I | K | V | G | I | N | G | F | G | R | I | G | R | M | V | F | Q | A | I | C | D | Q | G | L | I | G | T | E | I | D | V | V | A | V | V | D | M | S | . |
. |
. |
. |
. |
. |
. |
. |
T | N | A | E | Y | F | A | Y | Q | M | K | . |
. |
. |
. |
. |
. |
. |
H | D | T | V | H | G | R | P | K | Y | T | V | E | A |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| B | T | T | T |  |  |  |  |  |  |  |  | S |
| . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |
| B | T | T | T | B | S |
| S | S |
|  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 50 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . |
  |
  |   |
306 | . | . | . | 310 | . | . | . | . | . | . | . | . | . | |
|
|
|
320 | . | . | |
. | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|  |  |  | . | . | . | . |  |
|
| . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | G | Q | Q | P | W | S | L | P | V | D | I | A | L | . |
. |
. |
. |
P | C | A | . |
T | Q | N | E | L | D | V | D | A | A | H | Q | L | I | A | N | G | V | K | A | V | A | E | G | A | N | M | P | T | T | I | E | A | T | E | L | F | Q | Q | A | G | V |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |
|
|
|
| . | . | . | . |
|
|
| . |   |   |   |   |
|   |   |   |
|
|   |   |
|   |
|   |   |   |
|
|
|
|
|
|
|
|   |
|   |
|   |
|
|   |   |
|
|   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |   |   | . |
|
|
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |
|   |   |
|
|   |   |
|
|
Template Sequence |   |
V | K | S | S | P | S | V | E | T | A | D | V | L | V | V | N | G | H | R | I | K | C | V | K | A | Q | R | N | P | A | D | L | P | W | G | K | L | . |
G | V | D | Y | V | I | E | S | T | G | L | F | T | D | K | L | K | A | E | G | H | I | K | G | G | A |
Template Known Secondary structure |   |
 |
| S | S | T | T |
| S | S |
|
|  |  |  |  | T | T |  |  |  |  |  |  |  |
|
| S | S | G | G | G | S |
|  |  |  |  | . | T |
|
|  |  |  |  |
| S | S | S |
|
| B |  |  |  |  | T |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |
| . |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
66 | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
. | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|