Job Description P00370 Confidence 96.86% Date Thu Jan 5 10:56:35 GMT 2012 Rank 153 Aligned Residues 113 % Identity 18% Template c3uagA_ PDB info PDB header:ligase Chain: A: PDB Molecule:protein (udp-n-acetylmuramoyl-l-alanine:d- PDBTitle: udp-n-acetylmuramoyl-l-alanine:d-glutamate ligase Resolution 1.77 Å

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		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		G	F	E	G	M	R	V	S	V	S	G	S	G	N	V	A	Q	Y	A	I	E	K	A	M	E	F	G	A	R	V	I	T	A	S	D	S	S	G	T	V	V	D	E	S	G	F	T	K	E	K	L	A	R	L	I	E	I	K	A	S	R	D	G	R	V	A	D	Y	A	K	E	F	G	L	V	Y	L	.	E	G
Query Conservation																																																																															.
Alig confidence																																	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																																	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	Y	Q	G	K	N	V	V	I	I	G	L	G	L	T	G	L	S	C	V	D	F	F	L	A	R	G	V	T	P	R	.	V	M	D	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	T	P	P	G	L	D	K	L	P	E	A	V	E	R	H	T	G	S	L
Template Known Secondary structure				T	T									S												T	T	T					.				S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		T	T	G	G	G	S		T	T	S					S	S
Template Predicted Secondary structure																																	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.																								.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.																	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure																.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence																.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		Q	Q	P	W	S	L	P	V	D	I	A	L	P	C	.	A	T	Q	N	E	L	D	V	D	A	A	H	Q	L	I	A	N	G	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	A	E	G	A	N	M	P	T	T	I	E	A	T	.	.	E	L	F	Q	Q	A	G	V	L	F	A
Query Conservation																.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence																.					.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation																					.	.
Template Sequence		N	D	E	W	L	M	A	A	D	L	I	V	A	S	P	G	I	A	L	.	.	A	H	P	S	L	S	A	A	A	D	A	G	I	E	I	V	G	D	I	E	L	F	C	R	E	A	Q	A	P	I	V	A	I	T	G	S	N	G	K	S	T	V	T	T	L	V	G	E	M	A	K	A	A	G	V	N	V	G
Template Known Secondary structure							T	T		S						T	T	S		T	.	.	T	S									T	T																S								S	S																T	T
Template Predicted Secondary structure																					.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions