Job Description P00370 Confidence 96.24% Date Thu Jan 5 10:56:35 GMT 2012 Rank 192 Aligned Residues 160 % Identity 16% Template c3pwzA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase 3; PDBTitle: crystal structure of an ael1 enzyme from pseudomonas putida Resolution 1.71 Å

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		216	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		V	Y	F	T	E	A	M	L	K	R	H	.	G	M	G	F	E	G	M	R	V	S	V	S	G	S	G	N	V	A	Q	Y	A	I	E	K	A	M	E	F	G	A	R	V	I	T	A	S	D	S	S	G	T	V	V	D	E	S	G	F	T	K	E	K	L	A	R	L	I	E	I	K	A	S	R	D	G	R	V	A
Query Conservation													.
Alig confidence													.																																								.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Sequence		G	I	G	L	L	R	D	I	E	E	N	L	G	E	P	L	R	N	R	R	V	L	L	L	G	A	G	G	A	V	R	G	A	L	L	P	F	L	Q	A	G	P	S	E	L	V	I	A	N	R	D	.	.	.	.	.	.	.	.	.	.	M	A	K	A	L	A	L	R	N	E	L	D	H	S	.	.	.	.	.
Template Known Secondary structure											T	T	S					T	T	S								S													T			S							S		.	.	.	.	.	.	.	.	.	.														T	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.											.	.	.	.	.	.	160	.	.	.	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.				.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.		.	.	.	.	.	.	370
Predicted Secondary structure																													.	.	.																																											.
Query SS confidence																													.	.	.																																											.
Query Sequence		D	Y	A	K	E	F	G	L	V	Y	L	E	G	Q	Q	P	W	S	L	P	V	D	I	A	L	P	C	.	.	.	A	T	Q	N	E	L	D	V	D	A	A	H	Q	L	I	A	N	G	V	K	A	V	A	E	G	A	N	M	P	T	T	I	E	A	T	E	L	F	Q	Q	A	G	.	V	L	F	A	P	G	K
Query Conservation																													.	.	.																																											.
Alig confidence		.	.	.	.	.	.																						.	.	.																		.	.																								.
Template Conservation		.	.	.	.	.	.																																										.	.
Template Sequence		.	.	.	.	.	.	R	L	R	I	S	R	Y	E	A	L	E	G	Q	S	F	D	I	V	V	N	A	T	S	A	S	L	T	A	D	L	P	P	L	P	A	D	V	L	G	E	A	.	.	A	L	A	Y	E	L	A	Y	G	K	G	L	T	P	F	L	R	L	A	R	E	Q	G	Q	A	R	L	A	D	G	V
Template Known Secondary structure		.	.	.	.	.	.	T						S	G	G	G	T	T				S						S	S	G	G	G	G	T							G	G	G	G	T	T		.	.	S					S	S		S			S											S							T
Template Predicted Secondary structure		.	.	.	.	.	.																																										.	.
Template SS confidence
								168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	N	A	G	G	V	A	T	S	G	L	E	M	A	Q	N	A	A	R	L	G	W	K	A	E	K	V	D	A	R	L
Query Conservation
Alig confidence																.	.	.	.
Template Conservation																.	.	.	.
Template Sequence		G	M	L	V	E	Q	A	A	E	A	F	A	W	W	.	.	.	.	R	G	V	R	P	D	T	R	A	V	I	N	Q	L
Template Known Secondary structure																.	.	.	.		S
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.					.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions