Job Description P00370 Confidence 98.13% Date Thu Jan 5 10:56:35 GMT 2012 Rank 43 Aligned Residues 165 % Identity 11% Template c3n7uD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:formate dehydrogenase; PDBTitle: nad-dependent formate dehydrogenase from higher-plant arabidopsis2 thaliana in complex with nad and azide Resolution 2.00 Å

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		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	R	H	G	M	G	F	E	G	M	R	V	S	V	S	G	S	G	N	V	A	Q	Y	A	I	E	K	A	M	E	F	G	A	R	V	I	T	A	S	D	S	S	G	T	V	V	D	E	S	G	F	T	K	E	K	L	A	R	L	I	E	I	K	A	S	R	D	G	R	V	A	D	Y	A	K	E	F	G	L
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	Y	R	A	Y	D	L	E	G	K	T	I	G	T	V	G	A	G	R	I	G	K	L	L	L	Q	R	L	K	P	F	G	C	N	L	L	Y	.	.	.	.	.	.	.	.	H	D	R	L	Q	M	A	P	E	L	E	K	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A
Template Known Secondary structure				T	T				S	T	T									S											G	G	G							.	.	.	.	.	.	.	.			S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.									220	.	.	.	.	.	.	.	.	.	230	.	.	.																			.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.						.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.																																				.	.										.
Query SS confidence																					.	.	.	.	.																																				.	.										.
Query Sequence		V	Y	L	E	G	Q	Q	P	W	S	L	P	V	D	I	A	L	P	C	.	.	.	.	.	A	T	Q	N	E	L	D	V	D	A	A	H	Q	L	I	A	N	G	V	K	A	V	A	E	G	A	N	M	P	T	T	I	E	A	T	.	.	E	L	F	Q	Q	A	G	V	L	.	F	A	P	G	K	A	A	N	A
Query Conservation																					.	.	.	.	.																																				.	.										.
Alig confidence																					.	.	.	.	.																		.	.																	.	.										.
Template Conservation																																											.	.
Template Sequence		K	F	V	E	D	L	N	E	M	L	P	K	C	D	V	I	V	I	N	M	P	L	T	E	K	T	R	G	M	F	N	K	E	L	I	G	K	L	K	K	G	.	.	V	L	I	V	N	N	A	R	G	A	I	M	E	R	Q	A	V	V	D	A	V	E	S	G	H	I	G	G	Y	S	G	D	V	W	D	P	Q
Template Known Secondary structure					S	S					G	G	G		S						S				T	T	T	T	T		B							T	S		T	T	.	.							S		G	G	G	B												T	S							S			S	S	S
Template Predicted Secondary structure																																											.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		375	.	.	.	.	380	.	.	.	.	.	.	.				.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		G	G	V	A	T	S	G	L	E	M	A	Q	N	.	.	.	A	A	R	L	G	W	K	A	E	K	V	D	A	R	L	H	H	I	M	L	D	I	H	H	A	C	V	E
Query Conservation															.	.	.
Alig confidence															.	.	.
Template Conservation
Template Sequence		P	A	P	K	D	H	P	W	R	Y	M	P	N	Q	A	M	T	P	H	T	S	G	T	T	I	D	A	Q	L	R	Y	A	A	G	T	K	D	M	L	E	R	Y	F	K
Template Known Secondary structure		S			T	T		G	G	G	T	S	T	T					S	S		G	G	G	S																				T
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions