Job Description P00370 Confidence 97.99% Date Thu Jan 5 10:56:35 GMT 2012 Rank 52 Aligned Residues 159 % Identity 14% Template c3k5pA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: crystal structure of amino acid-binding act: d-isomer specific 2-2 hydroxyacid dehydrogenase catalytic domain from brucella melitensis Resolution 2.15 Å

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		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	G	F	E	G	M	R	V	S	V	S	G	S	G	N	V	A	Q	Y	A	I	E	K	A	M	E	F	G	A	R	V	I	T	A	S	D	S	S	G	T	V	V	D	E	S	G	F	T	K	E	K	L	A	R	L	I	E	I	K	A	S	R	D	G	R	V	A	D	Y	A	K	E	F	G	L	V	Y	L	E
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	R	E	V	R	G	K	T	L	G	I	V	G	Y	G	N	I	G	S	Q	V	G	N	L	A	E	S	L	G	M	T	V	R	Y	.	.	.	.	.	.	.	.	Y	D	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	L	Q	Y	G	N	V	K	P	A	A
Template Known Secondary structure					S	T	T									S													T	T						.	.	.	.	.	.	.	.			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					B	T	T	B				S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180									.	.	.	.																							.	.	.	.	.	190	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.		.	.	.	.	370
Predicted Secondary structure																																																				.	.										.						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.										.						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Q	Q	P	W	S	L	P	V	D	I	A	L	P	C	A	T	Q	N	E	L	D	V	D	A	A	H	Q	L	I	A	N	G	V	K	A	V	A	E	G	A	N	M	P	T	T	I	E	A	T	.	.	E	L	F	Q	Q	A	G	V	L	.	F	A	P	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																				.	.										.						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.																	.	.										.						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.
Template Sequence		S	L	D	E	L	L	K	T	S	D	V	V	S	L	H	V	P	S	K	L	I	T	E	A	K	L	R	K	M	K	K	G	.	.	A	F	L	I	N	N	A	R	G	S	D	V	D	L	E	A	L	A	K	V	L	Q	E	G	H	L	A	G	A	A	I	D	V	F	P	V	E	P	A	S	N	G	E	R	F	S
Template Known Secondary structure		S									S											B								S		T	T	.	.							S		T	T	S	B											T	T	S										S	S			S	S	T	T	S
Template Predicted Secondary structure																																		.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
				371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	A	N	A	G	G	V	A	T	S	G	L	E	M	A	Q	N	A	A	R	L	G	W	K	A	E	K	V	D	A	R	L	H	H	I	M	L	D	I	H	H	A	C	V	E	H	G	G	E	G	E	Q	T	N	Y
Query Conservation		.	.
Alig confidence		.	.										.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.
Template Sequence		T	P	L	Q	G	L	E	N	V	I	L	.	.	.	.	.	.	.	.	T	P	H	I	G	G	S	T	E	E	A	Q	E	R	I	G	T	E	V	T	R	K	L	V	E	Y	S	D	V	G	S	T	V	G	A	V	N	F
Template Known Secondary structure			T	T	T	T		T	T				.	.	.	.	.	.	.	.			S		T	T																											T	T	B	S	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290									.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions