Job Description P00370 Confidence 93.10% Date Thu Jan 5 10:56:35 GMT 2012 Rank 442 Aligned Residues 113 % Identity 14% Template c3fwzA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli Resolution 1.79 Å

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		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	E	G	M	R	V	S	V	S	G	S	G	N	V	A	Q	Y	A	I	E	K	A	M	E	F	G	A	R	V	I	T	A	S	D	S	S	G	T	V	V	D	E	S	G	F	T	K	E	K	L	A	R	L	I	E	I	K	A	S	R	D	G	R	V	A	D	Y	A	K	E	F	G	L	V	Y	L	E	G	Q
Query Conservation
Alig confidence						.																											.				.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.																											.				.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	C	N	.	H	A	L	L	V	G	Y	G	R	V	G	S	L	L	G	E	K	L	L	A	S	D	I	P	L	V	.	V	I	E	.	.	.	.	.	.	.	.	.	.	T	S	R	T	R	V	D	E	L	R	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	R	A	V	L	G	N
Template Known Secondary structure					S	.								S													T	T					.				.	.	.	.	.	.	.	.	.	.	S											T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T						S
Template Predicted Secondary structure						.																											.				.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		415	.	.	.		.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.		.	.	.											.	.	450	.	.	.	.	.	.	.	.	.																460	.	.	.	.	.	.	.
										309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.			340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.			.	.	.	.	.	370	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																.	.																										.	.
Query SS confidence		.	.	.	.	.	.	.	.																																.	.																										.	.
Query Sequence		.	.	.	.	.	.	.	.	Q	P	W	S	L	P	V	D	I	A	L	P	C	A	T	Q	N	E	L	D	V	D	A	A	H	Q	L	I	A	N	G	.	.	V	K	A	V	A	E	G	A	N	M	P	T	T	I	E	A	T	E	L	F	Q	Q	A	G	V	.	.	L	F	A	P	G	K	A	A
Query Conservation		.	.	.	.	.	.	.	.																																.	.																										.	.
Alig confidence		.	.	.	.	.	.	.	.																																.	.										.	.	.	.													.	.
Template Conservation																																																				.	.	.	.
Template Sequence		A	A	N	E	E	I	X	Q	L	A	H	L	E	C	A	K	W	L	I	L	T	I	P	N	G	Y	E	A	G	E	I	V	A	S	A	R	A	K	N	P	D	I	E	I	I	A	R	A	H	Y	.	.	.	.	D	D	E	V	A	Y	I	T	E	R	G	A	N	Q	V	V	X	G	E	R	E	I
Template Known Secondary structure		T	T	S							T	T	G	G	G		S							S																	S	S	S							S	S	.	.	.	.										T	T		S
Template Predicted Secondary structure																																																				.	.	.	.
Template SS confidence
		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.					.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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