Return to main results Retrieve Phyre Job Id

Job DescriptionP00370
Confidence97.03%DateThu Jan 5 10:56:35 GMT 2012
Rank138Aligned Residues103
% Identity26%Templatec3docD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase; PDBTitle: crystal structure of trka glyceraldehyde-3-phosphate2 dehydrogenase from brucella melitensis
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   234.....240.........250..... ....260.........270.........280.........290.........300........
Predicted Secondary structure 




...

























..
Query SS confidence 





















. . .




















































. .
Query Sequence  RVSVSGSGNVAQYAIEKAMEFG. . . ARVITASDSSGTVVDESGFTKEKLARLIEIKASRDGRVADYAKEFGLVYLEGQ. .
Query Conservation   




 



   
  
   
...







  
 



 


   
                     
   
   ..
Alig confidence 





















...







..........


































..
Template Conservation 











 



        
 





..........       



 


  
     
      
 
 
  
Template Sequence  RVAINGFGRIGRNILRAIVESGRTDIQVVAIND. . . . . . . . . . LGPVETNAHLLRYDSVHGRFPKEVEVAGDTIDVGYGP
Template Known Secondary structure  S
ST

S
..........SS


TTT
S
SS

TTSSSS
Template Predicted Secondary structure 









..........

















Template SS confidence 















































































   4.....10.........20.........30...... ...40.........50.........60.........70...
 
   309310.........320.........330.........340.......
Predicted Secondary structure  ............


















Query SS confidence  . . . . . . . . . . . .






































Query Sequence  . . . . . . . . . . . . QPWSLPVDIALPCATQNELDVDAAHQLIANGVKAVAEGA
Query Conservation  ............  
    






    
   

  
 
   






Alig confidence  ............













.























Template Conservation 
 
     
  
 
   






 
.
     
 
  

  


 




Template Sequence  IKVHAVRNPAELPWKEENVDIALECT. GIFTSRDKAALHLEAGAKRVIVSA
Template Known Secondary structure 

S
GGGS
T
S
S.SS

STT
SSS
Template Predicted Secondary structure 














.










Template SS confidence 


















































   74.....80.........90......... 100.........110.........120...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions