Job Description P00370 Confidence 100.00% Date Thu Jan 5 10:56:35 GMT 2012 Rank 4 Aligned Residues 412 % Identity 33% Template c3aogA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: crystal structure of glutamate dehydrogenase (gdhb) from thermus2 thermophilus (glu bound form) Resolution 2.10 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	Q	T	E	F	A	Q	A	V	R	E	V	M	T	T	L	W	P	F	L	E	Q	N	P	K	Y	R	Q	M	S	L	L	E	R	L	V	E	P	E	R	V	I	Q	F	R	V	V	W	V	D	D	R	N	Q	I	Q	V	N	R	A	W	R	V	Q	F	S	S	A	I	G	P	Y	K	G	G	M	R	F	H
Query Conservation
Alig confidence																												.	.	.	.	.
Template Conservation																												.	.	.	.	.
Template Sequence		G	K	D	G	G	P	W	E	I	F	T	E	Q	V	D	R	V	V	P	Y	L	G	R	L	A	P	.	.	.	.	.	L	A	E	S	L	K	R	P	K	R	V	L	I	V	D	V	P	V	R	L	D	D	G	S	V	A	Y	F	E	G	Y	R	V	H	H	N	T	A	R	G	P	A	K	G	G	V	R	Y	H
Template Known Secondary structure		T	T			T													G	G	G		G	G	G	G	G	.	.	.	.	.	G	G	G	G	G	G	S		S												T	T	S															T	T	S	S
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.						.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	V	N	L	S	I	L	K	F	L	G	F	E	Q	T	F	K	N	A	L	T	T	L	P	M	G	G	G	K	G	G	S	D	F	D	P	K	G	K	S	E	G	E	V	M	R	F	C	Q	A	L	M	T	E	L	Y	R	H	L	G	A	D	T	D	V	P	A	G	D	I	G	V	G	G	R	E	V	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E	V	T	L	S	E	V	M	A	L	A	G	W	M	T	I	K	N	A	A	V	G	L	P	Y	G	G	G	K	G	G	I	R	V	D	P	R	K	L	S	P	G	E	L	E	R	L	T	R	R	Y	T	S	E	I	G	I	L	L	G	P	D	R	D	I	P	A	P	D	V	N	T	G	E	R	E	M	A	W
Template Known Secondary structure		T	T																					T		S												G	G	G	S																	G	G	G		B	T	T	T					B		T	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		179	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		M	A	G	M	M	K	K	L	S	N	.	N	T	A	C	V	F	T	G	K	G	L	S	F	G	G	S	L	I	R	P	E	A	T	G	Y	G	L	V	Y	F	T	E	A	M	L	K	R	H	G	M	G	F	E	G	M	R	V	S	V	S	G	S	G	N	V	A	Q	Y	A	I	E	K	A	M	E	F	G	A	R
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		M	M	D	T	Y	S	M	N	V	G	R	T	V	P	G	V	V	T	G	K	P	I	A	L	G	G	S	L	G	R	R	D	A	T	G	R	G	V	F	I	T	A	A	A	A	A	E	K	I	G	L	Q	V	E	G	A	R	V	A	I	Q	G	F	G	N	V	G	N	A	A	A	R	A	F	H	D	H	G	A	R
Template Known Secondary structure											T	S			G	G	G	S	S	S			G	G	G	T			T	T		T	T																		T			S	T	T									S													T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	T	A	S	D	S	S	G	T	V	V	D	E	S	G	F	T	K	E	K	L	A	R	L	I	E	I	K	A	S	R	D	G	R	V	A	D	Y	A	K	E	F	G	L	V	Y	L	E	G	Q	Q	P	W	S	L	P	V	D	I	A	L	P	C	A	T	Q	N	E	L	D	V	D	A	A	H	Q	L	I	A
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.
Template Sequence		V	V	A	V	Q	D	H	T	G	T	V	Y	N	E	A	G	I	D	P	Y	D	L	L	R	H	V	Q	E	F	G	G	V	R	G	Y	.	.	.	.	.	.	.	P	K	A	E	P	L	P	A	A	D	F	W	G	L	P	V	E	F	L	V	P	A	A	L	E	K	Q	I	T	E	Q	N	A	W	R	I	R	A
Template Known Secondary structure								S	S						T	T														T	S	S	S	T	T		.	.	.	.	.	.	.	T	T	S									T	T				S						S	S	S	S		B		T	T	T	G	G	G
Template Predicted Secondary structure																																					.	.	.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.								280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	V	K	A	V	A	E	G	A	N	M	P	T	T	I	E	A	T	E	L	F	Q	Q	A	G	V	L	F	A	P	G	K	A	A	N	A	G	G	V	A	T	S	G	L	E	M	A	Q	N	A	A	R	L	G	W	K	A	E	K	V	D	A	R	L	H	H	I	M	L	D	I	H	H	A	C	V	E	H	G
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	R	I	V	A	E	G	A	N	G	P	T	T	P	A	A	D	D	I	L	L	E	K	G	V	L	V	V	P	D	V	I	A	N	A	G	G	V	T	V	S	Y	F	E	W	V	Q	D	F	N	S	Y	F	W	T	E	E	E	I	N	A	R	L	E	R	V	L	R	N	A	F	E	A	V	W	Q	V	A
Template Known Secondary structure		.	.	.	S						S	S	S		B												T										T	T														T	T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	G	E	Q	T	N	Y	V	Q	G	A	N	I	A	G	F	V	K	V	A	D	A	M	L	A	Q	G	V
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		Q	E	.	K	K	I	P	L	R	T	A	A	Y	V	V	A	A	T	R	V	L	E	A	R	A	L	R	G	L
Template Known Secondary structure				.		T
Template Predicted Secondary structure				.
Template SS confidence
		395	.		.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.