Job Description P00370 Confidence 100.00% Date Thu Jan 5 10:56:35 GMT 2012 Rank 3 Aligned Residues 410 % Identity 28% Template c3aoeC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:glutamate dehydrogenase; PDBTitle: crystal structure of hetero-hexameric glutamate dehydrogenase from2 thermus thermophilus (leu bound form) Resolution 2.60 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	P	N	Q	T	E	F	A	Q	A	V	R	E	V	M	T	T	L	W	P	F	L	E	Q	N	P	K	Y	R	Q	M	S	L	L	E	R	L	V	E	P	E	R	V	I	Q	F	R	V	V	W	V	D	D	R	N	Q	I	Q	V	N	R	A	W	R	V	Q	F	S	S	A	I	G	P	Y	K	G	G	M	R
Query Conservation
Alig confidence																														.	.	.	.	.
Template Conservation																														.	.	.	.	.
Template Sequence		R	P	P	E	D	P	G	L	W	D	T	Y	L	E	W	L	E	R	A	L	K	V	A	G	V	H	P	T	.	.	.	.	.	T	L	E	Y	L	A	H	P	K	R	L	V	T	L	S	L	P	V	V	M	D	D	G	K	V	R	I	F	Q	G	Y	R	V	V	H	D	I	A	R	G	P	A	K	G	G	V	R
Template Known Secondary structure				S	S																	T	T	S						.	.	.	.	.							S		S												T	T	S															T	T	S	S
Template Predicted Secondary structure																														.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.						.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	H	P	S	V	N	L	S	I	L	K	F	L	G	F	E	Q	T	F	K	N	A	L	T	T	L	P	M	G	G	G	K	G	G	S	D	F	D	P	K	G	K	S	E	G	E	V	M	R	F	C	Q	A	L	M	T	E	L	Y	R	H	L	G	A	D	T	D	V	P	A	G	D	I	G	V	G	G	R	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	P	G	V	T	L	G	Q	T	A	G	L	A	A	W	M	T	L	K	A	A	V	Y	D	L	P	F	G	G	A	A	G	G	I	A	V	D	P	K	G	L	S	P	Q	E	L	E	R	L	V	R	R	Y	T	A	E	L	V	G	L	I	G	P	D	S	D	I	L	G	P	D	L	G	A	D	Q	Q	V	M
Template Known Secondary structure				T	T																				T	T		S												G	G	G	S																	G	G	G		B	T	T	T						B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		177	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		G	F	M	A	G	M	M	K	K	L	S	N	.	N	T	A	C	V	F	T	G	K	G	L	S	F	G	G	S	L	I	R	P	E	A	T	G	Y	G	L	V	Y	F	T	E	A	M	L	K	R	H	G	M	G	F	E	G	M	R	V	S	V	S	G	S	G	N	V	A	Q	Y	A	I	E	K	A	M	E	F	G
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		A	W	I	M	D	T	Y	S	M	T	V	G	S	T	V	P	G	V	V	T	G	K	P	H	A	L	G	G	S	E	G	R	D	D	A	A	G	L	G	A	L	L	V	L	E	A	L	A	K	R	R	G	L	D	L	R	G	A	R	V	V	V	Q	G	L	G	Q	V	G	A	A	V	A	L	H	A	E	R	L	G
Template Known Secondary structure													T	S			G	G	G	B	S	S			G	G	G	T			S	S		S	S																	T	T				T	T									S													T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	V	I	T	A	S	D	S	S	G	T	V	V	D	E	S	G	F	T	K	E	K	L	A	R	L	I	E	I	K	A	S	R	D	G	R	V	A	D	Y	A	K	E	F	G	L	V	Y	L	E	G	Q	Q	P	W	S	L	P	V	D	I	A	L	P	C	A	T	Q	N	E	L	D	V	D	A	A	H	Q	L
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	R	V	V	A	V	A	T	S	M	G	G	M	Y	A	P	E	G	L	D	V	A	E	V	L	S	A	Y	E	A	T	G	S	L	P	R	L	.	.	.	.	.	.	.	.	.	.	.	D	L	A	P	E	E	V	F	G	L	E	A	E	V	L	V	L	A	A	R	E	G	A	L	D	G	D	R	A	R	Q	V
Template Known Secondary structure										T	T						T	T															S	S		S			.	.	.	.	.	.	.	.	.	.	.		B		G	G	G	S	T	T	S	S		S						S	S	S	S		B						T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.												.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	N	G	V	K	A	V	A	E	G	A	N	M	P	T	T	I	E	A	T	E	L	F	Q	Q	A	G	V	L	F	A	P	G	K	A	A	N	A	G	G	V	A	T	S	G	L	E	M	A	Q	N	A	A	R	L	G	W	K	A	E	K	V	D	A	R	L	H	H	I	M	L	D	I	H	H	A	C	V	E
Query Conservation
Alig confidence				.	.	.
Template Conservation				.	.	.
Template Sequence		Q	A	.	.	.	Q	A	V	V	E	V	A	N	F	G	L	N	P	E	A	E	A	Y	L	L	G	K	G	A	L	V	V	P	D	L	L	S	G	G	G	G	L	L	A	S	Y	L	E	W	V	Q	D	L	N	M	F	F	W	S	P	E	E	V	R	E	R	F	E	T	R	V	A	R	V	V	D	A	V	C	R
Template Known Secondary structure				.	.	.	S						S	T	T		B											T	T										T																	T
Template Predicted Secondary structure				.	.	.
Template SS confidence
		311	.				.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	G	E	G	E	Q	T	N	Y	V	Q	G	A	N	I	A	G	F	V	K	V	A	D	A	M	L	A	Q	G	V
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		R	A	E	R	.	G	G	L	D	L	R	M	G	A	L	A	L	A	L	E	R	L	D	E	A	T	R	L	R	G	V
Template Known Secondary structure						.		T
Template Predicted Secondary structure						.
Template SS confidence
		388	.	390	.		.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.