Job Description P00370 Confidence 97.75% Date Thu Jan 5 10:56:35 GMT 2012 Rank 64 Aligned Residues 160 % Identity 11% Template c2w2kB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:d-mandelate dehydrogenase; PDBTitle: crystal structure of the apo forms of rhodotorula graminis2 d-mandelate dehydrogenase at 1.8a. Resolution 1.85 Å

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		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		G	M	G	F	E	G	M	R	V	S	V	S	G	S	G	N	V	A	Q	Y	A	I	E	K	.	A	M	E	F	G	A	R	V	I	T	A	S	D	S	S	G	T	V	V	D	E	S	G	F	T	K	E	K	L	A	R	L	I	E	I	K	A	S	R	D	G	R	V	A	D	Y	A	K	E	F	G	L	V	Y	L
Query Conservation																										.
Alig confidence																										.											.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	H	N	P	R	G	H	V	L	G	A	V	G	L	G	A	I	Q	K	E	I	A	R	K	A	V	H	G	L	G	M	K	L	V	Y	.	.	.	.	.	.	.	.	Y	D	V	A	P	A	D	A	E	T	E	K	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	E	R	V
Template Known Secondary structure					S	T	T	S								S													T	T							.	.	.	.	.	.	.	.			S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.									.	.	.	.	.	.	.	200	.	.	.	.	.	.																			.	.	.	210	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.						.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.																																	.	.										.
Query SS confidence																					.	.	.	.	.																																	.	.										.
Query Sequence		E	G	Q	Q	P	W	S	L	P	V	D	I	A	L	P	C	A	T	Q	.	.	.	.	.	N	E	L	D	V	D	A	A	H	Q	L	I	A	N	G	V	K	A	V	A	E	G	A	N	M	P	T	T	I	E	A	T	.	.	E	L	F	Q	Q	A	G	V	L	.	F	A	P	G	K	A	A	N	A	G	G	V
Query Conservation																					.	.	.	.	.																																	.	.										.
Alig confidence																					.	.	.	.	.															.	.																	.	.										.											.
Template Conservation																																								.	.																																							.
Template Sequence		D	S	L	E	E	L	A	R	R	S	D	C	V	S	V	S	V	P	Y	M	K	L	T	H	H	L	I	D	E	A	F	F	A	A	M	K	P	G	.	.	S	R	I	V	N	T	A	R	G	P	V	I	S	Q	D	A	L	I	A	A	L	K	S	G	K	L	L	S	A	G	L	D	V	H	E	F	E	P	.	N
Template Known Secondary structure		S	S									S									S	G	G	G	T	T		B								S		T	T	.	.							S		G	G	G	B											T	T	S							S	S		T	T	T	T	.	S
Template Predicted Secondary structure																																								.	.																																							.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.
		378	.	380	.	.	.	.	.	.	.				.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		A	T	S	G	L	E	M	A	Q	N	.	.	.	A	A	R	L	G	W	K	A	E	K	V	D	A	R	L	H	H	I	M	L	D	I	H	H	A	C	V	E
Query Conservation												.	.	.
Alig confidence												.	.	.
Template Conservation
Template Sequence		V	S	K	E	L	I	E	M	K	H	V	T	L	T	T	H	I	G	G	V	A	I	E	T	F	H	E	F	E	R	L	T	M	T	N	I	D	R	F	L	L
Template Known Secondary structure								T	S	S	S					S	S		T	T		S
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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