Job Description P00370 Confidence 100.00% Date Thu Jan 5 10:56:35 GMT 2012 Rank 7 Aligned Residues 405 % Identity 31% Template c2tmgD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:protein (glutamate dehydrogenase); PDBTitle: thermotoga maritima glutamate dehydrogenase mutant s128r,2 t158e, n117r, s160e Resolution 2.90 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	Q	A	V	R	E	V	M	T	T	L	W	P	F	L	E	Q	N	P	K	Y	R	Q	M	S	L	L	E	R	L	V	E	P	E	R	V	I	Q	F	R	V	V	W	V	D	D	R	N	Q	I	Q	V	N	R	A	W	R	V	Q	F	S	S	A	I	G	P	Y	K	G	G	M	R	F	H	P	S	V	N	L
Query Conservation
Alig confidence																							.	.	.	.	.
Template Conservation																							.	.	.	.	.
Template Sequence		L	Y	E	M	A	V	E	Q	F	N	R	A	A	S	L	M	D	L	E	S	D	.	.	.	.	.	L	A	E	V	L	R	R	P	K	R	V	L	I	V	E	F	P	V	R	M	D	D	G	H	V	E	V	F	T	G	Y	R	V	Q	H	N	V	A	R	G	P	A	K	G	G	I	R	Y	H	P	D	V	T	L
Template Known Secondary structure																	T	T					.	.	.	.	.							S		S										B		T	T	S		B													T	T	S	S									S	S
Template Predicted Secondary structure																							.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.						.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	L	K	F	L	G	F	E	Q	T	F	K	N	A	L	T	T	L	P	M	G	G	G	K	G	G	S	D	F	D	P	K	G	K	S	E	G	E	V	M	R	F	C	Q	A	L	M	T	E	L	Y	R	H	L	G	A	D	T	D	V	P	A	G	D	I	G	V	G	G	R	E	V	G	F	M	A	G	M	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	V	K	A	L	A	F	W	M	T	W	K	T	A	V	M	N	L	P	F	G	G	G	K	G	G	V	R	V	D	P	K	K	L	S	R	R	E	L	E	R	L	S	R	R	F	F	R	E	I	Q	V	I	I	G	P	Y	N	D	I	P	A	P	D	V	N	T	N	A	D	V	I	A	W	Y	M	D	E	Y
Template Known Secondary structure																			T		S												G	G	G	S																T	G	G	G		B	T	T	T					B		T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		184	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.
Predicted Secondary structure							.																																																																			.
Query SS confidence							.																																																																			.
Query Sequence		K	K	L	S	N	.	N	T	A	C	V	F	T	G	K	G	L	S	F	G	G	S	L	I	R	P	E	A	T	G	Y	G	L	V	Y	F	T	E	A	M	L	K	R	H	G	M	G	F	E	G	M	R	V	S	V	S	G	S	G	N	V	A	Q	Y	A	I	E	K	A	M	E	F	.	G	A	R	V	I	T	A
Query Conservation							.																																																																			.
Alig confidence							.																																																																			.
Template Conservation
Template Sequence		E	M	N	V	G	H	T	V	L	G	I	V	T	G	K	P	V	E	L	G	G	S	K	G	R	E	E	A	T	G	R	G	V	K	V	C	A	G	L	A	M	D	V	L	G	I	D	P	K	K	A	T	V	A	V	Q	G	F	G	N	V	G	Q	F	A	A	L	L	I	S	Q	E	L	G	S	K	V	V	A	V
Template Known Secondary structure						S	S					S		S	S			G	G	G	T			T	T	T	T	T																	T	T			T	T	T									S													T	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	S	S	G	T	V	V	D	E	S	G	F	T	K	E	K	L	A	R	L	I	E	I	K	A	S	R	D	G	R	V	A	D	Y	A	K	E	F	G	L	V	Y	L	E	G	Q	Q	P	W	S	L	P	V	D	I	A	L	P	C	A	T	Q	N	E	L	D	V	D	A	A	H	Q	L	I	A	N	G	V	K
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.																																							.	.	.
Template Conservation																																	.	.	.	.	.	.	.																																							.	.	.
Template Sequence		S	D	S	R	G	G	I	Y	N	P	E	G	F	D	V	E	E	L	I	R	Y	K	K	E	H	G	T	V	V	T	Y	.	.	.	.	.	.	.	P	K	G	E	R	I	T	N	E	E	L	L	E	L	D	V	D	I	L	V	P	A	A	L	E	G	A	I	H	A	G	N	A	E	R	I	K	A	.	.	.	K
Template Known Secondary structure				S	S						T	T														S	S		S	T	T		.	.	.	.	.	.	.	S	S										T	T		S		S						S		T	T	S	B						T	T				.	.	.	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.																																							.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270								.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.				.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	A	E	G	A	N	M	P	T	T	I	E	A	T	E	L	F	Q	Q	A	G	V	L	F	A	P	G	K	A	A	N	A	G	G	V	A	T	S	G	L	E	M	A	Q	N	A	A	R	L	G	W	K	A	E	K	V	D	A	R	L	H	H	I	M	L	D	I	H	H	A	C	V	E	H	G	G	E	G	E
Query Conservation
Alig confidence																																																																																.
Template Conservation																																																																																.
Template Sequence		A	V	V	E	G	A	N	G	P	T	T	P	E	A	D	E	I	L	S	R	R	G	I	L	V	V	P	D	I	L	A	N	A	G	G	V	T	V	S	Y	F	E	W	V	Q	D	L	Q	S	F	F	W	D	L	D	Q	V	R	N	A	L	E	K	M	M	K	G	A	F	N	D	V	M	K	V	K	E	K	.	Y
Template Known Secondary structure							S	S	S		B											T	T										T																T	T																														.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	N	Y	V	Q	G	A	N	I	A	G	F	V	K	V	A	D	A	M	L	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	V	D	M	R	T	A	A	Y	I	L	A	I	D	R	V	A	Y	A	T	K	K	R
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.