Job Description P00370 Confidence 97.56% Date Thu Jan 5 10:56:35 GMT 2012 Rank 89 Aligned Residues 149 % Identity 19% Template c2pi1C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:d-lactate dehydrogenase; PDBTitle: crystal structure of d-lactate dehydrogenase from aquifex2 aeolicus complexed with nad and lactic acid Resolution 2.12 Å

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		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	G	F	E	G	M	R	V	S	V	S	G	S	G	N	V	A	Q	Y	A	I	E	K	A	M	E	F	G	A	R	V	I	T	A	S	D	S	S	G	T	V	V	D	E	S	G	F	T	K	E	K	L	A	R	L	I	E	I	K	A	S	R	D	G	R	V	A	D	Y	A	K	E	F	G	L	V	Y	L	E
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	E	L	N	R	L	T	L	G	V	I	G	T	G	R	I	G	S	R	V	A	X	Y	G	L	A	F	G	X	K	V	L	C	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	V	K	R	E	D	L	K	E	K	G	C	V	Y	T	S
Template Known Secondary structure					G	G	G	S								S													T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S									T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170																													.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.						.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.		.	.	.	.	370
Predicted Secondary structure																		.	.	.	.	.																																			.	.										.						.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.																																			.	.										.						.	.	.	.	.	.	.	.
Query Sequence		G	Q	Q	P	W	S	L	P	V	D	I	A	L	P	C	A	.	.	.	.	.	T	Q	N	E	L	D	V	D	A	A	H	Q	L	I	A	N	G	V	K	A	V	A	E	G	A	N	M	P	T	T	I	E	A	T	.	.	E	L	F	Q	Q	A	G	V	L	.	F	A	P	G	K	.	.	.	.	.	.	.	.
Query Conservation																		.	.	.	.	.																																			.	.										.						.	.	.	.	.	.	.	.
Alig confidence									.									.	.	.	.	.																	.	.																	.	.										.						.	.	.	.	.	.	.	.
Template Conservation									.																														.	.
Template Sequence		L	D	E	L	L	K	E	.	S	D	V	I	S	L	H	V	P	Y	T	K	E	T	H	H	X	I	N	E	E	R	I	S	L	X	K	D	G	.	.	V	Y	L	I	N	T	A	R	G	K	V	V	D	T	D	A	L	Y	R	A	Y	Q	R	G	K	F	S	G	L	G	L	D	V	F	E	D	E	E	I	L	I
Template Known Secondary structure									.		S										T	T	T	T	T		B								S		T	T	.	.							S		G	G	G	B											T	T								S			T	T
Template Predicted Secondary structure									.																														.	.
Template SS confidence
		188	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
																				371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	N	A	G	G	V	A	T	S	G	L	E	M	A	Q	N	A	A	R	L	G	W	K	A	E	K	V	D	A	R	L	H	H	I	M	L	D	I	H	H	A	C	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.
Template Sequence		L	K	K	Y	T	E	G	K	A	T	D	K	N	L	K	I	L	E	L	A	C	K	D	N	V	I	I	.	.	.	.	.	.	.	.	T	P	H	I	A	Y	Y	T	D	K	S	L	E	R	I	R	E	E	T	V	K	V	V	K	A	F	V
Template Known Secondary structure		T	T	G	G	G	G	T														T	S	T	T				.	.	.	.	.	.	.	.			S		T	T		S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.									.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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