Job Description P00370 Confidence 96.72% Date Thu Jan 5 10:56:35 GMT 2012 Rank 163 Aligned Residues 164 % Identity 13% Template c2nloA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of the quinate dehydrogenase from corynebacterium2 glutamicum Resolution 1.64 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	F	T	E	A	M	L	K	R	H	G	M	G	F	E	G	M	R	V	S	V	S	G	S	G	N	V	A	Q	Y	A	I	E	K	A	M	E	F	G	A	R	V	I	T	A	S	D	S	S	G	T	V	V	D	E	S	G	F	T	K	E	K	L	A	R	L	I	E	I	K	A	S	R	D	G	R	V	A	D
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Sequence		V	S	G	F	G	R	G	M	E	E	G	L	P	N	A	K	L	D	S	V	V	Q	V	G	A	G	G	V	G	N	A	V	A	Y	A	L	V	T	H	G	V	Q	K	L	Q	V	A	D	.	.	.	.	.	.	.	.	.	.	L	D	T	S	R	A	Q	A	L	A	D	V	I	N	N	A	V	G	R	.	.	.
Template Known Secondary structure														T	T				S								S	T	T											T	T		S							.	.	.	.	.	.	.	.	.	.	S	S																T	S	.	.	.
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.																				.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.											.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.			.	.	.	.	.	320	.	.	.								.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure																					.	.										.	.	.	.	.	.	.
Query SS confidence																					.	.										.	.	.	.	.	.	.
Query Sequence		Y	A	K	E	F	G	L	V	Y	L	E	G	Q	Q	P	W	S	L	P	.	.	V	D	I	A	L	P	C	A	T	.	.	.	.	.	.	.	Q	N	E	L	D	V	D	A	A	H	Q	L	I	A	N	G	V	K	A	V	A	E	G	A	N	M	P	T	T	I	E	A	T	E	L	F	Q	Q	A	G	V	L	F
Query Conservation																					.	.										.	.	.	.	.	.	.
Alig confidence		.	.	.	.																.	.										.	.	.	.	.	.	.													.	.	.	.	.
Template Conservation		.	.	.	.																																														.	.	.	.	.
Template Sequence		.	.	.	.	E	A	V	V	G	V	D	A	R	G	I	E	D	V	I	A	A	A	D	G	V	V	N	A	T	P	M	G	M	P	A	H	P	G	T	A	F	D	V	S	C	L	T	K	D	.	.	.	.	.	H	W	V	G	D	V	V	Y	M	P	I	E	T	E	L	L	K	A	A	R	A	L	G	C	E	T
Template Known Secondary structure		.	.	.	.								S	T	T								S	S						S	S	T	T	S	T	T	S		S		S	S		G	G	G			T	T	.	.	.	.	.						S			S	S	S	S											T
Template Predicted Secondary structure		.	.	.	.																																														.	.	.	.	.
Template SS confidence
						197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.						.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	G	K	A	A	N	A	G	G	V	A	T	S	G	L	E	M	A	Q	N	A	A	R	L	G	W	K	A	E	K	V	D	A	R	L	H	H	I
Query Conservation
Alig confidence																				.	.	.	.
Template Conservation																				.	.	.	.
Template Sequence		L	D	G	T	R	M	A	I	H	Q	A	V	D	A	F	R	L	F	.	.	.	.	T	G	L	E	P	D	V	S	R	M	R	E	T	F	L	S	L
Template Known Secondary structure				T																.	.	.	.		S														T
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.					.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions