 |
Job Description | P00370 | Confidence | 94.46% | Date | Thu Jan 5 10:56:35 GMT 2012 |
Rank | 314 | Aligned Residues | 112 |
% Identity | 18% | Template | c2duwA_ |
PDB info |
PDB header:ligand binding protein | Chain: A: PDB Molecule:putative coa-binding protein; |
PDBTitle: solution structure of putative coa-binding protein of2 klebsiella pneumoniae
|
Resolution | UNK |
|
 |
  |   |
233 | . | . | . | . | . | . | 240 | |
|
|
|
. | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | R | V | S | V | S | G | S | . |
. |
. |
. |
G | N | V | A | Q | Y | A | I | E | K | A | M | E | F | G | A | R | V | I | T | A | S | D | S | S | G | T | V | V | D | E | S | G | F | T | K | E | K | L | A | R | L | I | E | I | K | A | S | R | D | G | R | V | A | D | Y | A | K | E | F | G | L | V | Y | L | E | G | Q |
Query Conservation |   |
  |   |
|
|
|
|
|   | . | . | . | . |
|
|
|
|   |   |   |
|   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|   |   |
|   |
|
|
|
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|   |   |   |   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |   |   |   |   |
|   | . | . |
|   |   |   |
|   |
|
|
Template Sequence |   |
R | T | I | A | L | V | G | A | S | D | K | P | D | R | P | S | Y | R | V | M | K | Y | L | L | D | Q | G | Y | H | V | I | P | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | P | K | V | A | G | K | T | L | L | . |
. |
G | Q | Q | G | Y | A | T | L |
Template Known Secondary structure |   |
|
|  |  |  |  | S |
|
| S |
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| S | S | S | T | T | S |  |  | T | . | . | T |  |  |
|
| S | S | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |
| . | . |
|  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 50 | . | . | . | . | . | . | |
|
. | . | . | 60 | . | . | . | . |
  |
  |   |
309 | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | P | W | S | L | P | V | D | I | A | L | P | C | A | T | Q | N | E | L | D | V | D | A | A | H | Q | L | I | A | N | G | V | K | A | V | A | E | G | A | N | M | P | T | T | I | E | A | T | E | L | F | Q | Q | A | G | V | L | F | A | P | G | K | A | A | N | A | G | G | V | A |
Query Conservation |   |
  |   |
|   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |
|   |   |   |
|
|   |   |
|   |
|   |   |   |
|
|
|
|
|
|
|
|   |
|   |
|   |
|
|   |   |
|
|   |   |
|
|
|   |
|
|
|
|   |   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |
|
|
|
|
|
|   |
| . |
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |   | . |
|   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |
|
|
|
| . | . | . |
|
|   |
|
|   |
Template Sequence |   |
A | D | V | P | E | K | V | D | M | V | D | V | F | R | . |
N | S | E | A | A | W | G | V | A | Q | E | A | I | A | I | G | A | K | T | L | W | L | Q | L | . |
G | V | I | N | E | Q | A | A | V | L | A | R | E | A | G | L | S | V | V | M | D | . |
. |
. |
R | C | P | A | I | E |
Template Known Secondary structure |   |
T | T |
| S | S |
|
| S |  |  |  |
|
| S | . |
| S | T |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |
|
| T | . | T |
|
|
|  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |
| S | . | . | . |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|  |  |  |  |  |  | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
| . | . | . |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | |
. | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
. | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | |
|
|
. | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|