Job Description P00370 Confidence 96.16% Date Thu Jan 5 10:56:35 GMT 2012 Rank 197 Aligned Residues 109 % Identity 19% Template c1vpdA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:tartronate semialdehyde reductase; PDBTitle: x-ray crystal structure of tartronate semialdehyde reductase2 [salmonella typhimurium lt2] Resolution 1.65 Å

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		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	V	S	V	S	G	S	G	N	V	A	Q	Y	A	I	E	K	A	M	E	F	G	A	R	V	I	T	A	S	D	S	S	G	T	V	V	D	E	S	G	F	T	K	E	K	L	A	R	L	I	E	I	K	A	S	R	D	G	R	V	A	D	Y	A	K	E	F	G	L	V	Y	L	E	G	Q	Q	P	W	S
Query Conservation
Alig confidence																													.				.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.				.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	K	V	G	F	I	G	L	G	I	X	G	K	P	X	S	K	N	L	L	K	A	G	Y	S	L	V	.	V	S	D	.	.	.	.	.	.	.	.	.	.	R	N	P	E	A	I	A	D	V	I	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	E	T	A	S	T	A	K	A	I	A
Template Known Secondary structure										S	T	T											T	T					.				.	.	.	.	.	.	.	.	.	.	S											T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					S	S
Template Predicted Secondary structure																													.				.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.											.	.	.	.	.	.	.	40	.	.	.	.																.	.	.	.	.	50	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.						330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350		.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure											.									.	.	.	.	.																						.
Query SS confidence											.									.	.	.	.	.																						.
Query Sequence		L	P	V	D	I	A	L	P	C	.	A	T	Q	N	E	L	D	V	.	.	.	.	.	D	A	A	H	Q	L	I	A	N	G	V	K	A	V	A	E	G	A	N	M	P	.	T	T	I	E	A	T	E	L	F	Q	Q	A	G	V	L	F	A
Query Conservation											.									.	.	.	.	.																						.
Alig confidence											.									.	.	.	.	.																						.
Template Conservation
Template Sequence		E	Q	C	D	V	I	I	T	X	L	P	N	S	P	H	V	K	E	V	A	L	G	E	N	G	I	I	E	G	A	K	P	G	T	V	L	I	D	X	S	S	I	A	P	L	A	S	R	E	I	S	D	A	L	K	A	K	G	V	E	X	L
Template Known Secondary structure					S							S	S										S	T	T								T	T							S																T	T	T
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions