Job Description P00370 Confidence 97.01% Date Thu Jan 5 10:56:35 GMT 2012 Rank 142 Aligned Residues 189 % Identity 16% Template c1vl6C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:malate oxidoreductase; PDBTitle: crystal structure of nad-dependent malic enzyme (tm0542) from2 thermotoga maritima at 2.61 a resolution Resolution 2.61 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		M	R	F	C	Q	A	L	M	T	E	L	Y	R	H	L	G	A	D	T	D	V	P	A	G	D	I	G	V	G	G	R	E	V	G	F	M	A	G	M	M	K	K	L	.	.	S	N	N	T	A	C	V	F	T	G	K	G	L	S	F	G	G	S	L	I	R	P	E	A	T	G	Y	G	L	V	Y	F	T	E	A
Query Conservation																																													.	.
Alig confidence																			.	.	.														.	.									.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.														.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	K	I	I	S	I	V	K	S	L	E	P	S	F	G	G	.	.	.	I	N	L	E	D	I	G	A	P	K	C	F	R	.	.	I	L	Q	R	L	S	E	E	X	N	I	P	V	F	H	D	D	Q	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	V	V	V	S	A	A	F	L	N
Template Known Secondary structure												T	G	G	G		S		.	.	.					S			T	T					.	.										S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.														.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.															.	160	.	.	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.				.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.
Query SS confidence																																																				.	.	.
Query Sequence		M	L	K	R	H	G	M	G	F	E	G	M	R	V	S	V	S	G	S	G	N	V	A	Q	Y	A	I	E	K	A	M	E	F	G	A	R	V	I	T	A	S	D	S	S	G	T	V	V	D	E	.	.	.	S	G	F	T	K	E	K	L	A	R	L	I	E	I	K	A	S	R	D	G	R	V	A	D	Y	A	K
Query Conservation																																																				.	.	.
Alig confidence																																																				.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	K	L	T	E	K	K	I	E	E	V	K	V	V	V	N	G	I	G	A	A	G	Y	N	I	V	K	F	L	L	D	L	G	V	K	N	V	V	A	V	D	R	K	G	I	L	N	E	N	D	P	E	T	C	L	N	E	Y	H	L	E	I	A	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Known Secondary structure							T			G	G	G									S														T		S							T	T					T	T	S	G	G	G		S	S									T	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.														.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	G	L	V	Y	L	E	G	Q	Q	P	W	S	L	P	V	D	I	A	L	P	C	A	T	Q	N	E	L	D	V	D	A	A	H	Q	L	I	A	N	G	V	K	A	V	A	E	G	A	N	M	P	T	T	I	E	A	T	E	L	F	Q	Q	A	G	V	L	F	A
Query Conservation
Alig confidence																.																										.	.
Template Conservation																.																										.	.
Template Sequence		N	P	E	R	L	S	G	D	L	E	T	A	L	E	.	G	A	D	F	F	I	G	V	S	R	G	N	I	L	K	P	E	W	I	K	K	X	S	R	K	.	.	P	V	I	F	A	L	A	N	P	V	P	E	I	D	P	E	L	A	R	E	A	G	A	F	I	V	A
Template Known Secondary structure			T	T				S							T	.	T		S						S		S	S		S						T	T	S		S	S	.	.								S	S	S		S	S								T	T		S
Template Predicted Secondary structure																.																										.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.			.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions