Job Description P00370 Confidence 100.00% Date Thu Jan 5 10:56:35 GMT 2012 Rank 5 Aligned Residues 416 % Identity 29% Template c1v9lA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: l-glutamate dehydrogenase from pyrobaculum islandicum2 complexed with nad Resolution 2.80 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	A	Q	A	V	R	E	V	M	T	T	L	W	P	F	L	E	Q	N	P	K	Y	R	Q	M	S	L	L	E	R	L	V	E	P	E	R	V	I	Q	F	R	V	V	W	V	D	D	R	N	Q	I	Q	V	N	R	A	W	R	V	Q	F	S	S	A	I	G	P	Y	K	G	G	M	R	F	H	P	S	V	N
Query Conservation
Alig confidence																								.	.	.	.	.
Template Conservation																								.	.	.	.	.
Template Sequence		G	F	L	E	Y	V	L	N	Y	V	K	K	G	V	E	L	G	G	F	P	E	D	.	.	.	.	.	F	Y	K	I	L	S	R	P	R	R	V	L	I	V	N	I	P	V	R	L	D	G	G	G	F	E	V	F	E	G	Y	R	V	Q	H	C	D	V	L	G	P	Y	K	G	G	V	R	F	H	P	E	V	T
Template Known Secondary structure																		T	T					.	.	.	.	.							S		S												S	S	S															S	S	S	S									T	T
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.						.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	I	L	K	F	L	G	F	E	Q	T	F	K	N	A	L	T	T	L	P	M	G	G	G	K	G	G	S	D	F	D	P	K	G	K	S	E	G	E	V	M	R	F	C	Q	A	L	M	T	E	L	Y	R	H	L	G	A	D	T	D	V	P	A	G	D	I	G	V	G	G	R	E	V	G	F	M	A	G	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	D	D	V	A	L	A	I	L	M	T	L	K	N	S	L	A	G	L	P	Y	G	G	A	K	G	A	V	R	V	D	P	K	K	L	S	Q	R	E	L	E	E	L	S	R	G	Y	A	R	A	I	A	P	L	I	G	D	V	V	D	I	P	A	P	D	V	G	T	N	A	Q	I	M	A	W	M	V	D	E
Template Known Secondary structure																			T	T		S										S		G	G	G	S																	G	G	G		B	T	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		183	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		M	K	K	L	S	N	N	T	.	A	C	V	F	T	G	K	G	L	S	F	G	G	S	L	I	R	P	E	A	T	G	Y	G	L	V	Y	F	T	E	A	M	L	K	R	H	G	M	G	F	E	G	M	R	V	S	V	S	G	S	G	N	V	A	Q	Y	A	I	E	K	A	M	E	F	G	A	R	V	I	T	A
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		Y	S	K	I	K	G	Y	N	V	P	G	V	F	T	S	K	P	P	E	L	W	G	N	P	V	R	E	Y	A	T	G	F	G	V	A	V	A	T	R	E	M	A	K	K	L	W	G	G	I	E	G	K	T	V	A	I	Q	G	M	G	N	V	G	R	W	T	A	Y	W	L	E	K	M	G	A	K	V	I	A	V
Template Known Secondary structure							T	S			G	G	G	S		S			S	S	S	S			G	G	G	G	G																			S			T	T									S												T	T	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	S	S	G	T	V	V	D	E	S	G	F	T	K	E	K	L	A	R	L	I	E	I	K	A	S	R	D	G	R	V	A	D	Y	A	K	E	F	G	L	V	Y	L	E	G	Q	Q	P	W	S	L	P	V	D	I	A	L	P	C	A	T	Q	N	E	L	D	V	D	A	A	H	Q	L	I	A	N	G	V	K
Query Conservation
Alig confidence																																					.																																									.	.	.
Template Conservation																																					.																																									.	.	.
Template Sequence		S	D	I	N	G	V	A	Y	R	K	E	G	L	N	V	E	L	I	Q	K	N	K	G	L	T	G	P	A	L	V	E	L	F	T	T	.	K	D	N	A	E	F	V	K	N	P	D	A	I	F	K	L	D	V	D	I	F	V	P	A	A	I	E	N	V	I	R	G	D	N	A	G	L	V	K	A	.	.	.	R
Template Known Secondary structure				S	S						T	T				T						T	T	T	S												.	T	S						S	S	T	T	G	G	G	G				S						S		S	S		B		T	T	T	T	T	T				.	.	.	S
Template Predicted Secondary structure																																					.																																									.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.				.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	A	E	G	A	N	M	P	T	T	I	E	A	T	E	L	F	Q	Q	A	G	V	L	F	A	P	G	K	A	A	N	A	G	G	V	A	T	S	G	L	E	M	A	Q	N	A	A	R	L	G	W	K	A	E	K	V	D	A	R	L	H	H	I	M	L	D	I	H	H	A	C	V	E	H	G	G	E	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	V	E	G	A	N	G	P	T	T	P	E	A	E	R	I	L	Y	E	R	G	V	V	V	V	P	D	I	L	A	N	A	G	G	V	I	M	S	Y	L	E	W	V	E	N	L	Q	W	Y	I	W	D	E	E	E	T	R	K	R	L	E	N	I	M	V	N	N	V	E	R	V	Y	K	R	W	Q	R	E	K
Template Known Secondary structure							S	S	S		B										T	T	T										S	T															T	T																												T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	N	Y	V	Q	G	A	N	I	A	G	F	V	K	V	A	D	A	M	L	A	Q	G	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	W	T	M	R	D	A	A	I	V	T	A	L	E	R	I	Y	N	A	M	K	I	R	G	W	I
Template Known Secondary structure		S																						T	T
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.