Job Description P00370 Confidence 96.45% Date Thu Jan 5 10:56:35 GMT 2012 Rank 175 Aligned Residues 161 % Identity 15% Template c1p74B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe) from2 haemophilus influenzae Resolution 2.40 Å

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		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	F	T	E	A	M	L	K	R	H	G	M	G	F	E	G	M	R	V	S	V	S	G	S	G	N	V	A	Q	Y	A	I	E	K	A	M	E	F	G	A	R	V	I	T	A	S	D	S	S	G	T	V	V	D	E	S	G	F	T	K	E	K	L	A	R	L	I	E	I	K	A	S	R	D	G	R	V	A	D
Query Conservation
Alig confidence																																														.						.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation																																														.						.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Sequence		G	I	G	L	V	T	D	L	Q	R	L	N	W	L	R	P	N	Q	H	V	L	I	L	G	A	G	G	A	T	K	G	V	L	L	P	L	L	Q	A	Q	Q	N	I	V	.	L	A	N	R	T	.	.	.	.	.	.	.	.	.	.	F	S	K	T	K	E	L	A	E	R	F	Q	P	Y	G	.	.	.	.	.
Template Known Secondary structure												T	T				T	T								S	S	T	T	T	T	T	T							T	T					.				S	S	.	.	.	.	.	.	.	.	.	.												G	G	G	S	.	.	.	.	.
Template Predicted Secondary structure																																														.						.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.											.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350		.	.	.	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.	.	.
Predicted Secondary structure																																																									.															.
Query SS confidence																																																									.															.
Query Sequence		Y	A	K	E	F	G	L	V	Y	L	E	G	Q	Q	P	W	S	L	P	V	D	I	A	L	P	C	A	T	Q	N	E	L	D	V	D	A	A	H	Q	L	I	A	N	G	V	K	A	V	A	E	G	A	N	M	P	.	T	T	I	E	A	T	E	L	F	Q	Q	A	G	V	.	L	F	A	P	G	K	A	A	N
Query Conservation																																																									.															.
Alig confidence		.	.	.	.	.																																				.	.	.	.	.											.															.
Template Conservation		.	.	.	.	.																																				.	.	.	.	.
Template Sequence		.	.	.	.	.	N	I	Q	A	V	S	M	D	S	I	P	L	Q	T	Y	D	L	V	I	N	A	T	S	A	A	S	V	D	A	E	I	L	K	L	G	.	.	.	.	.	S	A	F	Y	D	M	Q	Y	A	K	G	T	D	T	P	F	I	A	L	C	K	S	L	G	L	T	N	V	S	D	G	F	G	M	L
Template Known Secondary structure		.	.	.	.	.							G	G	G				S		B	S																	T	T	B	.	.	.	.	.	S					S				S	S	S											T	T							S
Template Predicted Secondary structure		.	.	.	.	.																																				.	.	.	.	.
Template SS confidence
							167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.						.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	G	V	A	T	S	G	L	E	M	A	Q	N	A	A	R	L	G	W	K	A	E	K	V	D	A	R	L	H	H	I	M
Query Conservation
Alig confidence													.	.	.	.
Template Conservation													.	.	.	.
Template Sequence		V	A	Q	A	A	H	S	F	H	L	W	.	.	.	.	R	G	V	M	P	D	F	V	S	V	Y	E	Q	L	K	K	A	M
Template Known Secondary structure													.	.	.	.		S
Template Predicted Secondary structure													.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.					.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions