Job Description P00370 Confidence 97.45% Date Thu Jan 5 10:56:35 GMT 2012 Rank 99 Aligned Residues 162 % Identity 14% Template c1nytC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: shikimate dehydrogenase aroe complexed with nadp+ Resolution 1.50 Å

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		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	F	T	E	A	M	L	K	R	H	G	M	G	F	E	G	M	R	V	S	V	S	G	S	G	N	V	A	Q	Y	A	I	E	K	A	M	E	F	G	A	R	V	I	T	A	S	D	S	S	G	T	V	V	D	E	S	G	F	T	K	E	K	L	A	R	L	I	E	I	K	A	S	R	D	G	R	V	A	D
Query Conservation
Alig confidence																																												.						.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Conservation																																												.						.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Sequence		G	V	G	L	L	S	D	L	E	R	L	S	F	I	R	P	G	L	R	I	L	L	I	G	A	G	G	A	S	R	G	V	L	L	P	L	L	S	L	D	C	A	.	V	T	I	T	N	.	.	.	.	.	.	.	.	.	.	R	T	V	S	R	A	E	E	L	A	K	L	F	A	H	T	G	.	.	.	.	.
Template Known Secondary structure													T				T	T									S													T	T			.						.	.	.	.	.	.	.	.	.	.	S	S											T	T	T	T	S	.	.	.	.	.
Template Predicted Secondary structure																																												.						.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.											150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.				.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.
Predicted Secondary structure																												.	.	.																																												.
Query SS confidence																												.	.	.																																												.
Query Sequence		Y	A	K	E	F	G	L	V	Y	L	E	G	Q	Q	P	W	S	L	P	V	D	I	A	L	P	C	.	.	.	A	T	Q	N	E	L	D	V	D	A	A	H	Q	L	I	A	N	G	V	K	A	V	A	E	G	A	N	M	P	T	T	I	E	A	T	E	L	F	Q	Q	A	G	V	.	L	F	A	P	G	K	A
Query Conservation																												.	.	.																																												.
Alig confidence		.	.	.	.	.																						.	.	.																		.	.																									.
Template Conservation		.	.	.	.	.																																										.	.
Template Sequence		.	.	.	.	.	S	I	Q	A	L	S	M	D	E	L	E	G	H	E	F	D	L	I	I	N	A	T	S	S	G	I	S	G	D	I	P	A	I	P	S	S	L	I	H	P	G	.	.	I	Y	C	Y	D	M	F	Y	Q	K	G	K	T	P	F	L	A	W	C	E	Q	R	G	S	K	R	N	A	D	G	L	G
Template Known Secondary structure		.	.	.	.	.							T	G	G	G	T	T				S						S	S		G	G	G	T							G	G	G			T	T	.	.						S				S	S											T	T							T
Template Predicted Secondary structure		.	.	.	.	.																																										.	.
Template SS confidence
							167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	A	G	G	V	A	T	S	G	L	E	M	A	Q	N	A	A	R	L	G	W	K	A	E	K	V	D	A	R	L	H	H
Query Conservation
Alig confidence															.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		M	L	V	A	Q	A	A	H	A	F	L	L	W	.	.	.	.	H	G	V	L	P	D	V	E	P	V	I	K	Q	L	Q	E
Template Known Secondary structure															.	.	.	.		S	S													T
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.					.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions