Job Description P00370 Confidence 100.00% Date Thu Jan 5 10:56:35 GMT 2012 Rank 8 Aligned Residues 412 % Identity 28% Template c1nr1A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase 1; PDBTitle: crystal structure of the r463a mutant of human glutamate2 dehydrogenase Resolution 3.30 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	T	E	F	A	Q	A	V	R	E	V	M	T	T	L	W	P	F	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	N	P	K	Y	R	Q	M	S	L	L	E	R	L	V	E	P	E	R	V	I	Q	F	R	V	V	W	V	D	D	R	N	Q	I	Q	V	N	R	A	W	R	V	Q
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.
Template Conservation																																												.	.	.	.
Template Sequence		D	P	N	F	F	K	M	V	E	G	F	F	D	R	G	A	S	I	V	E	D	K	L	V	E	D	L	R	T	R	E	S	E	E	Q	K	R	N	R	V	R	G	.	.	.	.	I	L	R	I	I	K	P	C	N	H	V	L	S	L	S	F	P	I	R	R	D	D	G	S	W	E	V	I	E	G	Y	R	A	Q
Template Known Secondary structure																														G	G	G		G	G	G	T	T	T	G	G	G		.	.	.	.						S	S														T	T	S
Template Predicted Secondary structure																																												.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.
Predicted Secondary structure																																																																											.	.
Query SS confidence																																																																											.	.
Query Sequence		F	S	S	A	I	G	P	Y	K	G	G	M	R	F	H	P	S	V	N	L	S	I	L	K	F	L	G	F	E	Q	T	F	K	N	A	L	T	T	L	P	M	G	G	G	K	G	G	S	D	F	D	P	K	G	K	S	E	G	E	V	M	R	F	C	Q	A	L	M	T	E	L	Y	R	.	.	H	L	G	A	D
Query Conservation																																																																											.	.
Alig confidence																																																																											.	.
Template Conservation
Template Sequence		H	S	Q	H	R	T	P	C	K	G	G	I	R	Y	S	T	D	V	S	V	D	E	V	K	A	L	A	S	L	M	T	Y	K	C	A	V	V	D	V	P	F	G	G	A	K	A	G	V	K	I	N	P	K	N	Y	T	D	N	E	L	E	K	I	T	R	R	F	T	M	E	L	A	K	K	G	F	I	G	P	G
Template Known Secondary structure					S	S	S	S									T	T																				T	T														G	G	G	S																		T	T	T	S		B	T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.									.	.
Predicted Secondary structure																														.	.	.	.																																							.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.																																							.	.	.	.	.	.	.	.
Query Sequence		T	D	V	P	A	G	D	I	G	V	G	G	R	E	V	G	F	M	A	G	M	M	K	K	L	S	N	N	.	.	.	.	T	A	C	V	F	T	G	K	G	L	S	F	G	G	S	L	I	R	P	E	A	T	G	Y	G	L	V	Y	F	T	E	A	M	L	K	R	H	G	.	.	.	.	.	.	.	.	M	G
Query Conservation																														.	.	.	.																																							.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.																																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	V	P	A	P	D	M	S	T	G	E	R	E	M	S	W	I	A	D	T	Y	A	S	T	I	G	H	Y	D	I	N	A	H	A	C	V	T	G	K	P	I	S	Q	G	G	I	H	G	R	I	S	A	T	G	R	G	V	F	H	G	I	E	N	F	I	N	E	A	S	Y	M	S	I	L	G	M	T	P	G
Template Known Secondary structure		T						B	T	T	B															T	G	G	G	S		T	T	G	G	G	S		S	S			G	G	G	T			T	T																		T						T	T	T	T		S		S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	G	M	R	V	S	V	S	G	S	G	N	V	A	Q	Y	A	I	E	K	A	M	E	F	G	A	R	V	I	T	A	S	D	S	S	G	T	V	V	D	E	S	G	F	T	K	E	K	L	A	R	L	I	E	I	K	A	S	R	D	G	R	V	A	D	Y	A	K	E	F	G	L	V	Y	L	E	G	Q	Q
Query Conservation
Alig confidence																																																																	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.
Template Sequence		F	G	D	K	T	F	V	V	Q	G	F	G	N	V	G	L	H	S	M	R	Y	L	H	R	F	G	A	K	C	I	A	V	G	E	S	D	G	S	I	W	N	P	D	G	I	D	P	K	E	L	E	D	F	K	L	Q	H	G	S	I	L	G	F	.	.	.	.	.	.	.	.	P	K	A	K	P	Y	E	G	S
Template Known Secondary structure		S	S	S	S					S			S													T	T							B		S	S		B				T	T														S	S		S	S	S		.	.	.	.	.	.	.	.	T	T						S
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.									.	310	.	.	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	W	S	L	P	V	D	I	A	L	P	C	A	T	Q	N	E	L	D	V	D	A	A	H	Q	L	I	A	N	G	V	K	A	V	A	E	G	A	N	M	P	T	T	I	E	A	T	E	L	F	Q	Q	A	G	V	L	F	A	P	G	K	A	A	N	A	G	G	V	A	T	S	G	L	E	M	A	Q	N	A	A
Query Conservation
Alig confidence																														.	.	.
Template Conservation																														.	.	.
Template Sequence		I	L	E	A	D	C	D	I	L	I	P	A	A	S	E	K	Q	L	T	K	S	N	A	P	R	V	K	A	.	.	.	K	I	I	A	E	G	A	N	G	P	T	T	P	E	A	D	K	I	F	L	E	R	N	I	M	V	I	P	D	L	Y	L	N	A	G	G	V	T	V	S	Y	F	E	W	L	K	N	L	N
Template Known Secondary structure		T	T	T	S			S						S	S	S	S		B		T	T	T	S	T	T				.	.	.	S						S	S	S		B											T	T										T	T
Template Predicted Secondary structure																														.	.	.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.				.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
									390	.	.	.	.	.	.	.																																												.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	R	L	G	W	K	A	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	A	R	L	H	H	I	M	L	D	I	H	H	A	C	V	E	H	G	G	E
Query Conservation		.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	V	S	Y	G	R	L	T	F	K	Y	E	R	D	S	N	Y	H	L	L	M	S	V	Q	E	S	L	E	R	K	F	G	K	H	G	G	T	I	P	I	V	P	T	A	E	F	Q	D	R	I	S	G	A	S	E	K	D	I	V	H	S	G	L	A	Y	T	M	E	A	S	A	R	Q	I	M	R	T	A	M	K
Template Known Secondary structure		T	S		T	T	T	T	T																				T	T	T	T	T		S	S	S	S				S											S
Template Predicted Secondary structure
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
		420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		G	E	.	Q	T	N	Y	V	Q	G	A	N	I	A	G	F	V	K	V	A	D	A	M	L	A	Q	G	V	I
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		Y	N	L	G	L	D	L	R	T	A	A	Y	V	N	A	I	E	K	V	F	K	V	Y	N	E	A	G	V	T
Template Known Secondary structure			T		S	S																				T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.