Job Description P00370 Confidence 100.00% Date Thu Jan 5 10:56:35 GMT 2012 Rank 12 Aligned Residues 341 % Identity 24% Template c1lehB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:leucine dehydrogenase; PDBTitle: leucine dehydrogenase from bacillus sphaericus Resolution 2.20 Å

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		50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.					.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure							.	.																																																	.	.	.	.
Query SS confidence							.	.																																																	.	.	.	.
Query Sequence		L	L	E	R	L	.	.	V	E	P	E	R	V	I	Q	F	R	V	V	W	V	D	D	R	N	Q	I	Q	V	N	R	A	W	R	V	Q	F	S	S	A	I	G	P	Y	K	G	G	M	R	F	H	P	S	V	N	.	.	.	.	L	S	I	L	K	F	L	G	F	E	Q	T	F	K	N	A	L	T	T	L	P
Query Conservation							.	.																																																	.	.	.	.
Alig confidence							.	.											.	.	.	.							.	.	.																										.	.	.	.
Template Conservation																			.	.	.	.							.	.	.
Template Sequence		I	F	K	Y	M	E	K	Y	D	Y	E	Q	L	V	F	C	Q	.	.	.	.	D	E	A	S	G	L	.	.	.	K	A	V	I	A	I	H	D	T	T	L	G	P	A	L	G	G	A	R	M	W	T	Y	N	A	E	E	E	A	I	E	D	A	L	R	L	A	R	G	M	T	Y	K	N	A	A	A	G	L	N
Template Known Secondary structure										T									.	.	.	.		T	T	T	T		.	.	.										S	S	S	S											S	S																						T	T		S
Template Predicted Secondary structure																			.	.	.	.							.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.					20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	G	G	K	G	G	S	D	F	D	P	K	G	K	S	E	G	E	V	M	R	F	C	Q	A	L	M	T	E	L	Y	R	H	L	G	A	D	T	D	V	P	A	G	D	I	G	V	G	G	R	E	V	G	F	M	A	G	M	M	K	K	L	S	N	N	T	A	C	V	F	T	G	K	G	L	S	F	G	G
Query Conservation
Alig confidence																																	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Sequence		L	G	G	G	K	T	V	I	I	G	D	P	F	A	D	K	N	E	D	M	F	R	A	L	G	R	F	I	Q	G	L	.	.	.	.	.	N	G	R	Y	I	T	A	E	D	V	G	T	T	V	D	D	M	D	L	I	H	Q	E	T	D	.	.	.	.	.	.	.	.	Y	V	T	G	I	S	P	A	F	G	S
Template Known Secondary structure											S		T	T	T	T															T	T	.	.	.	.	.	T	T	S			B				T	T											T	T		S	.	.	.	.	.	.	.	.		B		S
Template Predicted Secondary structure																																	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.						.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.									.	.	.	.	.	.	.	.	140	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		S	L	I	R	P	E	A	T	G	Y	G	L	V	Y	F	T	E	A	M	L	K	R	H	.	.	G	M	G	F	E	G	M	R	V	S	V	S	G	S	G	N	V	A	Q	Y	A	I	E	K	A	M	E	F	G	A	R	V	I	T	A	S	D	S	S	G	T	V	V	D	E	S	G	F	T	K	E	K	L	A	R
Query Conservation																									.	.
Alig confidence																									.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	G	N	P	S	P	V	T	A	Y	G	V	Y	R	G	M	K	A	A	A	K	E	A	F	G	S	D	S	L	E	G	L	A	V	S	V	Q	G	L	G	N	V	A	K	A	L	C	K	K	L	N	T	E	G	A	K	L	V	V	T	D	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																									S	S	S				S										S												T	T	T								S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		L	I	E	I	K	A	S	R	D	G	R	V	A	D	Y	A	K	E	F	G	L	V	Y	L	E	G	Q	Q	P	W	S	L	P	V	D	I	A	L	P	C	A	T	Q	N	E	L	D	V	D	A	A	H	Q	L	I	A	N	G	V	K	A	V	A	E	G	A	.	N	M	P	T	T	I	E	A	T	E	L	F	Q
Query Conservation																																																																				.
Alig confidence		.	.	.	.	.	.	.	.																																																	.	.	.								.
Template Conservation		.	.	.	.	.	.	.	.																																																	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	K	A	A	V	S	A	A	V	A	E	E	G	A	D	A	V	A	P	N	A	I	Y	G	V	T	C	D	I	F	A	P	C	A	L	G	A	V	L	N	D	F	T	I	P	Q	L	K	A	.	.	.	K	V	I	A	G	S	A	D	N	Q	L	K	D	P	R	H	G	K	Y	L	H
Template Known Secondary structure		.	.	.	.	.	.	.	.												T						T	T	T	T	T	T	S			S						S		S			B	S	T	T								.	.	.	S					S		S	S		B	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																																	.	.	.
Template SS confidence
										206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	G	V	L	F	A	P	G	K	A	A	N	A	G	G	V	A	T	S	G	L	E	M	A	Q	N	A	A	R	L	G	W	K	A	E	K	V	D	A	R	L	H	H	I	M	L	D	I	H	H	A	C	V	E	H	G	G	E	G	E	Q	T	N	Y	V	Q	G	A	N	I	A	G	F	V	K	V	A	D	A
Query Conservation
Alig confidence																										.	.	.	.	.	.																.														.
Template Conservation																										.	.	.	.	.	.																.														.
Template Sequence		E	L	G	I	V	Y	A	P	D	Y	V	I	N	A	G	G	V	I	N	V	A	D	E	L	.	.	.	.	.	.	Y	G	Y	N	R	T	R	A	M	K	R	V	D	G	I	.	Y	D	S	I	E	K	I	F	A	I	S	K	R	.	D	G	V	P	S	Y	V	A	A	D	R	M	A	E	E	R	I	A	K	V
Template Known Secondary structure				T										T	T									G	G	.	.	.	.	.	.	G															.														.		T
Template Predicted Secondary structure																										.	.	.	.	.	.																.														.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.							.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		441	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	A	Q	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	A	R	S	Q
Template Known Secondary structure				T	T		S
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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