Job Description P00370 Confidence 97.84% Date Thu Jan 5 10:56:35 GMT 2012 Rank 58 Aligned Residues 161 % Identity 12% Template c1gdhA_ PDB info PDB header:oxidoreductase(choh (d)-nad(p)+ (a)) Chain: A: PDB Molecule:d-glycerate dehydrogenase; PDBTitle: crystal structure of a nad-dependent d-glycerate2 dehydrogenase at 2.4 angstroms resolution Resolution 2.40 Å

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		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	G	F	E	G	M	R	V	S	V	S	G	S	G	N	V	A	Q	Y	A	I	E	K	A	M	E	F	G	A	R	V	I	T	A	S	D	S	S	G	T	V	V	D	E	S	G	F	T	K	E	K	L	A	R	L	I	E	I	K	A	S	R	D	G	R	V	A	D	Y	A	K	E	F	G	L	V	Y	L	E
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	K	L	D	N	K	T	L	G	I	Y	G	F	G	S	I	G	Q	A	L	A	K	R	A	Q	G	F	D	M	D	I	D	Y	.	.	.	.	.	.	.	.	F	D	T	H	R	A	S	S	S	D	E	A	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	T	F	H	D
Template Known Secondary structure						T	T									S												T	T	T						.	.	.	.	.	.	.	.			S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.									.	.	.	.	180	.	.	.	.	.	.	.	.	.																			190	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.						.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.																																.	.										.
Query SS confidence																					.	.	.	.	.																																.	.										.
Query Sequence		G	Q	Q	P	W	S	L	P	V	D	I	A	L	P	C	A	T	Q	N	.	.	.	.	.	E	L	D	V	D	A	A	H	Q	L	I	A	N	G	V	K	A	V	A	E	G	A	N	M	P	T	T	I	E	A	T	.	.	E	L	F	Q	Q	A	G	V	L	.	F	A	P	G	K	A	A	N	A	G	G	V	A
Query Conservation																					.	.	.	.	.																																.	.										.
Alig confidence																					.	.	.	.	.														.	.																	.	.										.
Template Conservation																																							.	.
Template Sequence		S	L	D	S	L	L	S	V	S	Q	F	F	S	L	N	A	P	S	T	P	E	T	R	Y	F	F	N	K	A	T	I	K	S	L	P	Q	G	.	.	A	I	V	V	N	T	A	R	G	D	L	V	D	N	E	L	V	V	A	A	L	E	A	G	R	L	A	Y	A	G	F	D	V	F	A	G	E	P	N	I	N
Template Known Secondary structure		S									S										T	T	T	T	T		B	S					T	T	S		T	T	.	.							S		G	G	G	B												T	S							S			T	T	T	T	S
Template Predicted Secondary structure																																							.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		379	380	.	.	.	.			.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		T	S	G	L	E	M	.	.	A	Q	N	A	A	R	L	G	W	K	A	E	K	V	D	A	R	L	H	H	I	M	L	D	I	H	H	A	C	V	E
Query Conservation								.	.
Alig confidence								.	.
Template Conservation
Template Sequence		E	G	Y	Y	D	L	P	N	T	F	L	F	P	H	I	G	S	A	A	T	Q	A	R	E	D	M	A	H	Q	A	N	D	L	I	D	A	L	F	G
Template Known Secondary structure		T	T	G	G	G		T	T					S	S		T	T		S																				T
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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