Job Description P00370 Confidence 97.74% Date Thu Jan 5 10:56:35 GMT 2012 Rank 66 Aligned Residues 157 % Identity 17% Template c1dxyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-2-hydroxyisocaproate dehydrogenase; PDBTitle: structure of d-2-hydroxyisocaproate dehydrogenase Resolution 1.86 Å

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		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	G	F	E	G	M	R	V	S	V	S	G	S	G	N	V	A	Q	Y	A	I	E	K	A	M	E	F	G	A	R	V	I	T	A	S	D	S	S	G	T	V	V	D	E	S	G	F	T	K	E	K	L	A	R	L	I	E	I	K	A	S	R	D	G	R	V	A	D	Y	A	K	E	F	G	L	V	Y	L	E
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	E	L	G	Q	Q	T	V	G	V	M	G	T	G	H	I	G	Q	V	A	I	K	L	F	K	G	F	G	A	K	V	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	P	Y	P	M	K	G	D	H	P	D	F	D	Y	V	S
Template Known Secondary structure					G	G	G	S								S													T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S			S	S			T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.																														.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.						.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.	.
Predicted Secondary structure																					.	.	.	.	.																																.	.										.									.	.	.	.	.
Query SS confidence																					.	.	.	.	.																																.	.										.									.	.	.	.	.
Query Sequence		G	Q	Q	P	W	S	L	P	V	D	I	A	L	P	C	A	T	Q	N	.	.	.	.	.	E	L	D	V	D	A	A	H	Q	L	I	A	N	G	V	K	A	V	A	E	G	A	N	M	P	T	T	I	E	A	T	.	.	E	L	F	Q	Q	A	G	V	L	.	F	A	P	G	K	A	A	N	.	.	.	.	.
Query Conservation																					.	.	.	.	.																																.	.										.									.	.	.	.	.
Alig confidence									.												.	.	.	.	.														.	.																	.	.										.									.	.	.	.	.
Template Conservation									.																														.	.
Template Sequence		L	E	D	L	F	K	Q	.	S	D	V	I	D	L	H	V	P	G	I	E	Q	N	T	H	I	I	N	E	A	A	F	N	L	M	K	P	G	.	.	A	I	V	I	N	T	A	R	P	N	L	I	D	T	Q	A	M	L	S	N	L	K	S	G	K	L	A	G	V	G	I	D	T	Y	E	Y	E	T	E	D	L
Template Known Secondary structure									.		S										G	G	G	T	T	S	B								S		T	T	.	.							S		T	T	S	B											T	T	S							S	S		T	T
Template Predicted Secondary structure									.																														.	.
Template SS confidence
		191	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
								374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.						390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	A	G	G	V	A	T	S	G	L	E	M	A	Q	N	A	A	.	.	.	.	.	R	L	G	W	K	A	E	K	V	D	A	R	L	H	H	I	M	L	D	I	H	H	A	C	V	E
Query Conservation		.	.	.	.	.	.																	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																	.	.	.	.	.
Template Conservation
Template Sequence		L	N	L	A	K	H	G	S	F	K	D	P	L	W	D	E	L	L	G	M	P	N	V	V	L	S	P	H	I	A	Y	Y	T	E	T	A	V	H	N	M	V	Y	F	S	L	Q	H	L	V	D	F	L	T
Template Known Secondary structure								S	S											T		T	T					S	S		T	T		S
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions