Job Description A4UR83 Confidence 98.29% Date Thu Jan 5 10:55:11 GMT 2012 Rank 28 Aligned Residues 140 % Identity 15% Template d1uika1 SCOP info Double-stranded beta-helix RmlC-like cupins Germin/Seed storage 7S protein Resolution 2.30

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																								.																													.	.	.	.
Query SS confidence																								.																													.	.	.	.
Query Sequence		E	I	A	T	A	R	E	Q	Q	L	F	N	G	K	N	F	H	V	F	I	Y	N	.	K	T	E	S	I	S	G	L	H	Q	H	D	Y	Y	E	F	T	L	V	L	T	G	R	Y	F	Q	E	I	.	.	.	.	N	G	K	R	V	L	L	E	R	G	D	F	V	F	I	P	L	G	S	H	H	Q	S	F	Y
Query Conservation																								.																													.	.	.	.
Alig confidence																								.																													.	.	.	.
Template Conservation
Template Sequence		Q	R	F	N	K	R	S	Q	Q	L	Q	N	L	R	D	Y	R	I	L	E	F	N	S	K	P	N	T	L	L	L	P	H	H	A	D	A	D	Y	L	I	V	I	L	N	G	T	A	I	L	T	L	V	N	N	D	D	R	D	S	Y	N	L	Q	S	G	D	A	L	R	V	P	A	G	T	T	Y	Y	V	V	N
Template Known Secondary structure				T	T	S	S		G	G	G	G	G	G	T	T										S	S									S										S									S	S									T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	G	A	T	R	I	L	N	V	G	I	S	K	R	F	F	E	Q	H	Y	L	P	L	L	P	Y	C	F	V	A	S	Q	V	Y	R	T	N	N	A	F	L	T	Y	V	E	T	V	I	S	S	L	K	F	R	E	T	G	L	E	E	F	V	E	M	V	T	F	Y	V	I	N	R	L	R	H	Y	R	E	E
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	D	N	D	E	N	L	R	M	I	T	L	A	I	P	V	N	K	P	G	R	F	E	S	F	F	L	S	S	T	Q	A	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	S												S	S	B	T	T	B							S			S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	I	D	D	V	P	Q	W	L	K	S	T	V	E	K	M	H	D	K	E	Q	F	S	E	S	A	L	E	N	M	V	A	L	S	A	K	S	Q	E	Y	L	T	R	A	T	Q	R	Y	Y	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	L	Q	G	F	S	K	N	I	L	E	A	S	Y	D	T	K	F	E	E	I	N	K	V	L	F	G	Q	E	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	G	S										T	S									T	T				S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																						286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions