Return to main results Retrieve Phyre Job Id

Job DescriptionA4UR83
Confidence88.14%DateThu Jan 5 10:55:11 GMT 2012
Rank240Aligned Residues155
% Identity14%Templatec1zreB_
PDB info PDB header:gene regulation/dnaChain: B: PDB Molecule:catabolite gene activator; PDBTitle: 4 crystal structures of cap-dna with all base-pair2 substitutions at position 6, cap-[6g;17c]icap38 dna
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   58.60.........70 .........80.... .....90.........100.........110.........120.........130..
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Query Sequence  EINGKRVLLERGD. . . . FVFIPLGSHHQSFY. EFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETV
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Template Sequence  KYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKK
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   22.......30.........40.........50.........60.........70.........80.........90.........100.
 
   133......140.........150.........160.........170.........180........ .190.........200....
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Query Sequence  ISSLKFRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFS. . . . . . . . ESALENMVALSAKSQE
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Template Sequence  FRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRE
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   102.......110.........120.........130.........140.........150.........160.........170.........180.
 
   205....210..
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Query Sequence  YLTRATQR
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Template Sequence  TVGRILKM
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   182.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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