Return to main results Retrieve Phyre Job Id

Job DescriptionP21361
Confidence0.74%DateThu Jan 5 11:38:06 GMT 2012
Rank61Aligned Residues11
% Identity36%Templatec1j1hA_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:small protein b; PDBTitle: solution structure of a tmrna-binding protein, smpb, from2 thermus thermophilus
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........
Predicted Secondary structure 







Query SS confidence 










Query Sequence  SGGNFKNDPQR
Query Conservation 
 








Alig confidence 










Template Conservation       
 

 
Template Sequence  KGSYANVDPRR
Template Known Secondary structure  SS

S



S
Template Predicted Secondary structure 








Template SS confidence 










   65....70.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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