Job Description P0ACS2 Confidence 35.14% Date Thu Jan 5 11:18:53 GMT 2012 Rank 485 Aligned Residues 87 % Identity 14% Template d1yg2a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PadR-like Resolution 2.20

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	A	L	H	F	Y	E	S	K	G	L	I	T	S	I	R	N	S	G	N	Q	R	R	Y	K	R	D	V	L	R	Y	V	A	I	I	K	I	A	Q	R	I	G	I	P	L	A	T	I	G	E	A	F	G	V	L	P	E	G	H	T	L	S	A	K	E	W	K	Q	L	S	S	Q	W	R	E	E	L	D	R
Query Conservation
Alig confidence																					.	.	.	.	.
Template Conservation																					.	.	.	.	.
Template Sequence		Y	R	E	L	N	K	M	G	E	Q	G	L	V	T	C	V	L	E	V	.	.	.	.	.	Y	S	I	T	Q	A	G	R	S	A	L	G	E	W	F	D	Q	P	T	A	H	P	T	V	R	D	E	F	S	A	K	L	M	A	C	S	V	Q	S	A	E	P	Y	R	L	Q	L	A	E	L	V	E	E	S	R	K
Template Known Secondary structure											T	T	S								.	.	.	.	.																	S																	G	G	G	T	S
Template Predicted Secondary structure																					.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	H	T	L	V	A	L	R	D	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	A	H	Y	Q	E	I	E	A	A	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions