Job Description P0ACS2 Confidence 35.77% Date Thu Jan 5 11:18:53 GMT 2012 Rank 481 Aligned Residues 87 % Identity 16% Template c3pvpA_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: structure of mycobacterium tuberculosis dnaa-dbd in complex with box22 dna Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	E	V	A	K	R	S	G	V	A	V	S	A	L	H	F	Y	E	S	K	G	L	I	T	S	I	R	N	S	G	N	Q	R	R	Y	K	R	D	V	L	R	Y	V	A	I	I	K	I	A	Q	R	I	G	I	P	L	A	T	I	G	E	A	F	G	V	L	P	E	G	H	T	L	S	A	K	E	W	K	Q
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Template Sequence		M	A	A	T	A	E	Y	F	D	T	T	V	E	E	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	G	K	T	R	A	L	A	Q	S	R	Q	I	A	M	Y	L	C	R	E	L	T	D	L	S	L	P	K	I	G	Q	A	F	.	.	.	.	G	R	D	H	T	T	V	M	Y	A	Q	R
Template Known Secondary structure									T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S																																T	.	.	.	.	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.															.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.					.	.	.	470	.	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	S	Q	W	R	E	E	L	D	R	R	I	H	T	L	V	A	L	R	D	E	L	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	L	S	E	M	A	E	R	R	E	V	F	D	H	V	K	E	L	T	T	R	I	R	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions