Job Description P0ACS2 Confidence 39.70% Date Thu Jan 5 11:18:53 GMT 2012 Rank 453 Aligned Residues 83 % Identity 18% Template c3h0dB_ PDB info PDB header:transcription/dna Chain: B: PDB Molecule:ctsr; PDBTitle: crystal structure of ctsr in complex with a 26bp dna duplex Resolution 2.40 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.							.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.					.															.	.	.	.
Query SS confidence																			.	.	.	.	.	.					.															.	.	.	.
Query Sequence		G	E	V	A	K	R	S	G	V	A	V	S	A	L	H	F	Y	.	.	.	.	.	.	E	S	K	G	.	L	I	T	S	I	R	N	S	G	N	Q	R	R	Y	.	.	.	.	K	R	D	V	L	R	Y	V	A	I	I	K	I	A	Q	R	I	G	I	P	L	A	T	I	G	E	A	F	G	V	L	P	E	G
Query Conservation																			.	.	.	.	.	.					.															.	.	.	.
Alig confidence																			.	.	.	.	.	.					.															.	.	.	.
Template Conservation
Template Sequence		S	E	I	A	N	K	F	R	C	V	P	S	Q	I	N	Y	V	I	N	T	R	F	T	L	E	R	G	Y	I	V	E	S	K	R	G	G	G	G	Y	I	R	I	X	K	V	K	T	K	S	E	A	Q	L	I	D	Q	L	L	E	L	I	D	H	R	I	S	Q	S	S	A	E	D	V	I	K	R	L	X	E	E
Template Known Secondary structure								T	T	S		T											S		T	T	T	T								S	T	T											S													S		S																	T
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	L	S	A	K	E	W	K	Q	L	S	S	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	I	S	E	R	E	A	K	X	X	L	S	V
Template Known Secondary structure		T	S	S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions