Job Description P0ACS2 Confidence 41.71% Date Thu Jan 5 11:18:53 GMT 2012 Rank 434 Aligned Residues 64 % Identity 23% Template c2plyB_ PDB info PDB header:translation/rna Chain: B: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: structure of the mrna binding fragment of elongation factor2 selb in complex with secis rna. Resolution 2.60 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.					.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.																														.														.
Query SS confidence															.	.	.	.																														.														.
Query Sequence		T	P	G	E	V	A	K	R	S	G	V	A	V	.	.	.	.	S	A	L	H	F	Y	E	S	K	G	L	I	T	S	I	R	N	S	G	N	Q	R	R	Y	K	R	D	V	L	.	R	Y	V	A	I	I	K	I	A	Q	R	I	G	.	I	P	L	A	T	I	G	E	A	F	G	V
Query Conservation															.	.	.	.																														.														.
Alig confidence															.	.	.	.															.	.	.													.														.
Template Conservation																																	.	.	.
Template Sequence		W	V	K	E	V	A	G	S	F	N	L	D	P	S	E	L	E	E	L	L	H	Y	L	V	R	E	G	V	L	V	K	.	.	.	I	N	D	E	F	Y	W	H	R	Q	A	L	G	E	A	R	E	V	I	K	N	L	A	S	T	G	P	F	G	L	A	E	A	R	D	A	L	G	S
Template Known Secondary structure										T	T																	T	S				.	.	.	S	S	S	S																				T	T	S		B										T
Template Predicted Secondary structure																																	.	.	.
Template SS confidence
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.				.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions