Job Description P0ACS2 Confidence 94.82% Date Thu Jan 5 11:18:53 GMT 2012 Rank 17 Aligned Residues 87 % Identity 18% Template c1hlvA_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:major centromere autoantigen b; PDBTitle: crystal structure of cenp-b(1-129) complexed with the cenp-2 b box dna Resolution 2.50 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.												.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.							.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Query Sequence		L	T	P	G	E	V	A	K	R	S	G	V	A	V	S	A	L	H	F	Y	E	S	.	.	.	.	.	.	.	.	.	.	.	K	G	L	I	T	S	I	R	N	S	G	N	Q	R	R	Y	K	R	D	V	L	R	Y	V	A	I	I	K	I	A	Q	R	I	G	I	P	L	A	T	.	.	.	.	.	.	I	G
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	K	G	E	I	A	R	R	F	N	I	P	P	S	T	L	S	T	I	L	K	N	K	R	A	I	L	A	S	E	R	K	Y	G	V	A	S	T	C	R	K	T	N	K	L	S	P	Y	D	K	L	E	G	L	L	I	A	W	F	Q	Q	I	R	A	A	G	L	P	V	K	G	I	I	L	K	E	K	A	L
Template Known Secondary structure		S										T												T												G	G	G	G	G	T								T	T															G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	F	G	V	L	P	E	G	H	T	L	S	A	K	E	W	K	Q	L	S	S	Q	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	A	E	E	L	G	M	D	D	F	T	A	S	N	G	W	L	D	R	F	R	R	R
Template Known Secondary structure								T		T	T
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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