 |
Job Description | P77184 | Confidence | 3.11% | Date | Thu Jan 5 12:26:08 GMT 2012 |
Rank | 72 | Aligned Residues | 56 |
% Identity | 23% | Template | d1tlya_ |
SCOP info | Transmembrane beta-barrels
| Tsx-like channel
| Tsx-like channel
|
Resolution | 3.01 |
|
 |
  |   |
52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 100 | . | |
|
. | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|  |  |  | . | . |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
Query Sequence |   |
D | V | L | T | G | S | D | D | G | R | H | S | N | T | S | L | A | W | G | A | G | V | Q | F | N | P | T | E | S | V | A | I | D | I | A | Y | E | G | P | G | S | G | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
W | R | T | D | G | F | I | . |
. |
V | G | V | G | Y | K | F |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |
|   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |
|
|
|
|
|
|
|
|   |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|
|   | . | . |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |
|   |   |   |   |
|   |
|   |   |   |   |   |
|
|
|   |
|   |
|   |   |   |   |
|
|
|
Template Sequence |   |
S | G | N | A | I | N | G | I | K | T | R | T | N | N | S | I | A | S | S | H | I | L | A | L | N | Y | . |
D | H | W | H | Y | S | V | V | A | R | Y | W | H | D | G | G | Q | W | N | D | D | A | E | L | N | F | G | N | G | N | F | N | V | R | S | T | G | W | G | G | Y | L | V | V | G | Y | N | F |
Template Known Secondary structure |   |
S |
| B |
| T | T | S | S | B | S | B |
| S |
|  |  |  |  |  |  |  |  |  |  |  |
| . | S | S |  |  |  |  |  |  |  |  |  |  |  | S | G | G | G | B |
| T | T |
|  |  |  | S | S | S |
|  |  |  |
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
199 | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | |
. | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|