Job Description P77184 Confidence 21.26% Date Thu Jan 5 12:26:08 GMT 2012 Rank 41 Aligned Residues 77 % Identity 14% Template c3rbhC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:alginate production protein alge; PDBTitle: structure of alginate export protein alge from pseudomonas aeruginosa Resolution 2.30 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100												.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	A	W	G	A	G	V	Q	F	N	P	T	E	S	V	A	I	D	I	A	Y	E	G	P	G	S	G	D	W	R	T	D	G	F	.	.	.	.	.	.	.	.	.	.	.	I	V	G	V	G	Y	K	F	M	L	T	G	S	D	D	G	R	H	S	N	T	S	L	A	W	G	A	G	V	Q	F	N	P	T
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.
Template Sequence		G	V	D	L	G	L	R	W	N	I	D	E	Q	W	K	A	G	V	G	Y	A	R	.	G	S	G	G	G	K	D	G	E	E	Q	F	Q	Q	T	G	L	E	S	N	R	S	N	F	T	G	T	R	S	R	V	H	R	F	G	E	A	F	R	G	E	L	S	N	L	Q	A	A	T	L	F	G	S	W	Q	L	R
Template Known Secondary structure												S	S	S										.					S	G	G	G	T	T						S	B							T	T	S	S	S	S				T	T		T	T	T				S	S	S													T
Template Predicted Secondary structure																								.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	V	A	I	D	I	A	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	D	Y	D	A	S	L	V	Y
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		390	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions