Job Description P77184 Confidence 4.95% Date Thu Jan 5 12:26:08 GMT 2012 Rank 57 Aligned Residues 100 % Identity 22% Template c3o44G_ PDB info PDB header:toxin Chain: G: PDB Molecule:hemolysin; PDBTitle: crystal structure of the vibrio cholerae cytolysin (hlya) heptameric2 pore Resolution 2.88 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.										.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.
Query Sequence		V	S	T	F	S	G	D	Y	L	R	V	T	D	N	K	G	K	T	H	D	V	L	T	G	S	D	D	G	R	H	S	N	T	S	L	A	W	G	A	G	V	Q	F	N	P	T	E	S	V	A	I	D	I	.	.	.	.	.	.	.	.	.	A	Y	E	G	P	G	S	G	D	W	R	T	D	G	F	I	V	G
Query Conservation																																																							.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.								.	.								.	.	.	.	.	.	.	.	.				.	.	.	.
Template Conservation																																			.	.	.	.								.	.																				.	.	.	.
Template Sequence		Y	R	V	N	L	E	R	S	L	Q	Y	G	I	V	G	S	A	T	P	D	A	K	I	V	R	I	S	L	D	D	D	S	T	.	.	.	.	G	A	G	I	H	L	N	.	.	D	Q	L	G	Y	R	Q	F	G	A	S	Y	T	T	L	D	A	Y	F	.	.	.	.	R	E	W	S	T	D	A	I	A	Q	D
Template Known Secondary structure									S	S		T	T			S		S	S											B	T	T	B		.	.	.	.		S						.	.	S	S									S	S			S	S	S			.	.	.	.
Template Predicted Secondary structure																																			.	.	.	.								.	.																				.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.					.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.					.	.	.	.	.	.	.	250	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	Y	K	F	M	L	T	G	S	D	D	G	R	H	S	N	T	S	L	A	W	G	A	G	V	Q	F	N	P	T	E	S	V	A	I	D	I	A	Y	E	G	P	G	S	G	D	W	R	T	D	G	F	I	V	G	V
Query Conservation
Alig confidence		.	.																			.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.
Template Conservation		.	.																			.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.
Template Sequence		.	.	Y	R	F	V	F	N	A	S	N	N	K	A	Q	I	L	K	T	F	.	.	.	.	.	.	.	.	.	P	V	D	N	.	.	.	.	.	.	.	I	N	E	K	F	E	R	K	E	V	S	G	F	E	L	G	V
Template Known Secondary structure		.	.								S	S	T	T								.	.	.	.	.	.	.	.	.	S		S		.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.																			.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.
Template SS confidence
				254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.										.	.	.	.								.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions