Job Description P77184 Confidence 2.95% Date Thu Jan 5 12:26:08 GMT 2012 Rank 74 Aligned Residues 106 % Identity 15% Template c2y0kA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:pyroglutatmate porin opdo; PDBTitle: crystal structure of pseudomonas aeruginosa opdo Resolution 2.30 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.											.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	G	M	A	Y	S	R	V	S	T	F	S	G	D	Y	L	R	V	T	D	N	K	G	K	T	H	D	V	L	T	G	S	D	D	G	R	H	S	N	T	S	L	A	W	G	A	G	V	Q	F	N	P	T	E	S	V	A	I	D	I	A	Y	E	G	P	G	S	.	.	.	.	.	.	.	.	.	.	G	D
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	R	G	A	H	L	D	R	N	K	L	.	.	.	.	.	.	.	.	.	.	.	.	N	S	S	S	D	Y	Q	V	F	S	A	N	R	I	G	G	R	S	D	A	F	D	F	A	G	G	D	Y	R	L	T	P	A	L	T	A	S	L	H	Q	G	R	L	K	D	I	Y	R	Q	T	F	A	G	L	V	H	T
Template Known Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	T	T		S	S		B					T	T	T					S											S	S	S	S											T	T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.													.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	R	T	D	G	F	I	V	G	V	G	Y	K	F	M	L	T	G	S	D	D	G	R	H	S	N	T	S	L	A	W	G	A	G	V	Q	F	N	P	T	E	S	V	A	I	D	I	A	Y	E
Query Conservation
Alig confidence							.																																	.
Template Conservation							.																																	.
Template Sequence		L	D	L	G	R	.	S	L	K	S	D	L	R	F	A	R	A	S	E	D	G	G	F	R	E	L	D	N	R	A	F	G	A	L	F	S	L	R	.	L	G	A	H	A	V	A	A	G	Y	Q
Template Known Secondary structure							.															T	T	S																.		T	T
Template Predicted Secondary structure							.																																	.
Template SS confidence
		212	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions