Job Description P77184 Confidence 2.16% Date Thu Jan 5 12:26:08 GMT 2012 Rank 98 Aligned Residues 99 % Identity 8% Template c2qtkB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:probable porin; PDBTitle: crystal structure of the outer membrane protein opdk from2 pseudomonas aeruginosa Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		M	R	N	R	W	F	S	V	M	V	G	P	S	V	R	V	N	E	W	F	S	A	Y	A	M	A	G	M	A	Y	S	R	V	S	T	F	S	G	D	Y	L	R	V	T	D	N	K	G	K	T	H	D	V	L	T	G	S	D	D	G	R	H	S	N	T	S	L	A	W	G	A	G	V	Q	F	N	P	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																		.	.	.	.	.	.	.																.	.																																						.	.	.
Template Conservation																		.	.	.	.	.	.	.																.	.
Template Sequence		I	D	S	H	T	V	Y	G	L	F	S	A	G	I	G	L	.	.	.	.	.	.	.	H	T	F	Y	L	G	L	Q	K	V	G	G	D	S	G	.	.	W	Q	S	V	Y	G	S	S	G	R	S	M	G	N	D	M	F	N	G	N	F	T	N	A	D	E	R	S	W	Q	V	R	Y	D	Y	D	F	V	G	L
Template Known Secondary structure																T	T	.	.	.	.	.	.	.													S	S		.	.				B	T	T			G	G	G	S	T	T		B	T	T	B				S	B	T												G	G	G	G
Template Predicted Secondary structure																		.	.	.	.	.	.	.																.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.								260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
			78	.	80	.	.	.	.	.	.	.							.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure		.											.	.	.	.	.	.
Query SS confidence		.											.	.	.	.	.	.
Query Sequence		.	T	E	S	V	A	I	D	I	A	Y	.	.	.	.	.	.	E	G	P	G	S	G	D	W	R	T	D	G	F	I	V	G	V	G	Y	K	F
Query Conservation		.											.	.	.	.	.	.
Alig confidence		.											.	.	.	.	.	.
Template Conservation
Template Sequence		G	W	P	G	L	I	G	M	V	R	Y	G	H	G	S	N	A	T	T	K	A	G	S	G	G	K	E	W	E	R	D	V	E	L	G	Y	T	V
Template Known Secondary structure		T		T	T														B		S	S		S
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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