Phyre 2 Results for O13512

Email	l.a.kelley@imperial.ac.uk
Description	O13512
Date	Mon Jul 2 19:10:05 BST 2012
Unique Job ID	98f31f3b2ea06c14

Summary

Top model

Image coloured by rainbow N → C terminus

Model (left) based on template c2zw3B_

Top template information

PDB header:cell adhesion
Chain: B: PDB Molecule:gap junction beta-2 protein;
PDBTitle: structure of the connexin-26 gap junction channel at 3.52 angstrom resolution

Confidence and coverage

Confidence:

13.1%

Coverage:

19%

24 residues ( 19% of your sequence) have been modelled with 13.1% confidence by the single highest scoring template.

You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.

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3D viewing

Interactive 3D view in Jmol

Sequence analysis

Secondary structure and disorder prediction

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60

Sequence M A G E A V S E H T P D S Q E V T V T S V V C C L D S V V E I G H H V V Y S V V T P L I V A V L I D T M A G E A V L E H

Secondary structure

SS confidence

Disorder ? ? ? ? ? ? ? ? ? ?
?

Disorder confidence

. . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120

Sequence T S D S Q E E I V T T V V C S V V P L V C F V V S V V C F V I S V V E I G H H V V Y S V V A P L T V T V A V E T I A E E

Secondary structure

SS confidence

Disorder

Disorder confidence

. . . . . .

Sequence M D S V H T

Secondary structure

SS confidence

Disorder
? ? ? ?

Disorder confidence

Confidence Key
High(9) Low (0)

? Disordered

Alpha helix

Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank	Aligned region

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence	M	A	G	E	A	V	S	E	H	T	P	D	S	Q	E	V	T	V	T	S	V	V	C	C	L	D	S	V	V	E	I	G	H	H	V	V	Y	S	V	V	T	P	L	I	V	A	V	L	I	D	T	M	A	G	E	A	V	L	E	H
Secondary structure
SS confidence
Disorder	?	?	?	?	?	?	?	?	?	?																																																		?
Disorder confidence

	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence	T	S	D	S	Q	E	E	I	V	T	T	V	V	C	S	V	V	P	L	V	C	F	V	V	S	V	V	C	F	V	I	S	V	V	E	I	G	H	H	V	V	Y	S	V	V	A	P	L	T	V	T	V	A	V	E	T	I	A	E	E
Secondary structure
SS confidence
Disorder
Disorder confidence

	.	.	.	.	.	.
Sequence	M	D	S	V	H	T
Secondary structure
SS confidence
Disorder			?	?	?	?
Disorder confidence